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feat(NTO/Medical): 10 BioPortal namespace stubs + 25 MedCare-rs SQL transcodes #3
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c4e1b14
docs(.claude): seed AGENT_LOG with Healthcare namespace bootstrap entry
claude 9d4c99b
feat(NTO/Medical): bootstrap 10 BioPortal namespace stubs (D-CASCADE-…
claude 3baf5b9
feat(NTO/Medical/sql_mirror): 25 MySQL->TTL stubs (D-CASCADE-V1-5)
claude 13a8d3f
fix(NTO/Medical): flatten BioPortal namespace stubs (codex P1 path la…
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| # OGIT Agent Log | ||
|
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| Append-only log of agent runs against the OGIT repository. | ||
| Newest entries on top. Each entry: D-ids touched, files added, | ||
| commit, validation result, outcome. | ||
|
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| --- | ||
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| ## 2026-05-07 — bootstrap Healthcare namespace | ||
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| **D-ids touched**: D-OGIT-HEALTHCARE-BOOTSTRAP (new); blocks | ||
| medcare-bridge hydrate (lance-graph/crates/lance-graph-ontology/src/bridges/medcare_bridge.rs:12, | ||
| NAMESPACE = "Healthcare"). | ||
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| **Files added** (14 TTL, 846 lines, branch claude/create-graph-ontology-crate-gkuJG): | ||
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| Entities under NTO/Healthcare/entities/: | ||
| - Patient.ttl (166 lines, source praxis_patient) | ||
| - Visit.ttl ( 86 lines, source praxis_patient_waitingroom) | ||
| - Diagnosis.ttl ( 95 lines, source pf_diagnosis) | ||
| - Treatment.ttl ( 57 lines, source pf_therapy) | ||
| - Medication.ttl (124 lines, source pat_medication; relates 5 combo_medication_*) | ||
| - VitalSign.ttl ( 60 lines, source pf_vital_bloodpressure as base of pf_vital_* family) | ||
| - LabValue.ttl ( 62 lines, source pf_laboratory_values; LOINC carried as out-of-namespace ref) | ||
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| Enumerations under NTO/Healthcare/enumerations/ (header + class declaration only): | ||
| - combo_medication_typ.ttl | ||
| - combo_medication_interval.ttl | ||
| - combo_medication_dailydose.ttl | ||
| - combo_medication_dose_unit.ttl | ||
| - combo_medication_stop_reason.ttl | ||
| - combo_addtreatment.ttl | ||
| - combo_spez.ttl | ||
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| **Relations**: | ||
| - Visit belongs Patient (pid FK) | ||
| - Diagnosis belongs Patient + relates Visit | ||
| - Treatment belongs Patient | ||
| - Medication belongs Patient + relates 5 combo_medication_* enums | ||
| - VitalSign belongs Patient | ||
| - LabValue belongs Patient + carries loincRef (out-of-namespace) | ||
| - Patient belongs Tenant (global ogit:tenant) | ||
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| **Style**: matches NTO/WorkOrder/entities/Position.ttl v4 baseline | ||
| (prefix block, rdfs:Class subClassOf ogit:Entity, ogit:scope "NTO", | ||
| ogit:parent ogit:Node, mandatory/optional/indexed lists, | ||
| ogit:allowed [ ogit:relates / ogit:belongs ], per-property triples | ||
| with ogit:type "xsd:..."). Namespace | ||
| ogit.Healthcare: <http://www.purl.org/ogit/Healthcare/>. Field | ||
| predicates camelCase (firstname, bloodPressureSystolic, etc.). | ||
| Provenance on every entity: dcterms:source | ||
| "AdaWorldAPI/MedCare-rs/.MYSQL/Struktur.sql:<TABLE>". | ||
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| **Validation**: rdflib 7.6.0 turtle-parsed all 14 files cleanly, | ||
| 14 ok / 0 bad, 690 triples total (Patient 142, Medication 117, | ||
| Diagnosis 82, Visit 72, LabValue 52, Treatment 50, VitalSign 47; | ||
| each enum 18). The crate-internal hydrate_real_ogit test suite | ||
| (/home/user/lance-graph/crates/lance-graph-ontology/tests/hydrate_real_ogit.rs) | ||
| runs 3/3 green but currently hardcodes Network + WorkOrder; a | ||
| Healthcare-specific hydration test is a follow-on. There is no | ||
| hydrate_real_ogit *example*, only a *test* — the path the spec | ||
| suggested fails with "no example target named hydrate_real_ogit". | ||
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| **Out of scope** (deferred): | ||
| - Full SNOMED CT / FMA / RadLex / LOINC ingestion | ||
| (lance-graph-rdf-fma-snomed-v1 remit). | ||
| - BioPortal namespace stubs under OGIT/NTO/Medical/ | ||
| (D-CASCADE-V1-4). | ||
| - Remaining ~22 combo_* enum tables (pf_allergy_*, | ||
| combo_operation, combo_vaccination, combo_morbidity, ...). | ||
| - Healthcare namespace registration in | ||
| OntologyRegistry::namespace_id so MedcareBridge::new resolves | ||
| the namespace at runtime — that is main-thread / lance-graph | ||
| work, not OGIT work. | ||
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| **Commit**: 74738b9 feat(ogit): bootstrap Healthcare namespace — | ||
| 7 clinical entities + 7 enums. Not pushed (per branch policy). | ||
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| **Outcome**: Healthcare namespace bootstrap complete. medcare-bridge | ||
| hydrate path is unblocked from the OGIT side. Awaiting main-thread | ||
| push and downstream registry wiring. |
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| @prefix ogit: <http://www.purl.org/ogit/> . | ||
| @prefix ogit.Medical: <http://www.purl.org/ogit/Medical/> . | ||
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | ||
| @prefix dcterms: <http://purl.org/dc/terms/> . | ||
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| ogit.Medical:CHEBI | ||
| a ogit:Namespace ; | ||
| rdfs:label "Chemical Entities of Biological Interest" ; | ||
| rdfs:comment "Open-license ontology of small molecular entities focused on biologically relevant compounds, classifying chemicals by structure and biological role; maintained by the EBI." ; | ||
| ogit:contextIri <http://purl.bioontology.org/ontology/CHEBI/> ; | ||
| ogit:contextId 19 ; | ||
| dcterms:source "AdaWorldAPI/MedCare-rs/releases/tag/bioportal-ontologies-2026-05-05/chebi.obo" ; | ||
| dcterms:license "CC-BY-4.0" ; | ||
| ogit:fileSize "259.6 MB" ; | ||
| ogit:tripleCount "~1.5M (estimate)" ; | ||
| ogit:loaderCrate "lance-graph-rdf" ; | ||
| ogit:loaderStatus "stub" . |
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| @prefix ogit: <http://www.purl.org/ogit/> . | ||
| @prefix ogit.Medical: <http://www.purl.org/ogit/Medical/> . | ||
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | ||
| @prefix dcterms: <http://purl.org/dc/terms/> . | ||
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| ogit.Medical:DRON | ||
| a ogit:Namespace ; | ||
| rdfs:label "Drug Ontology" ; | ||
| rdfs:comment "Comprehensive ontology of drug products, ingredients, and pharmaceutical preparations derived from RxNorm and FDA sources, supporting pharmacovigilance and clinical decision support." ; | ||
| ogit:contextIri <http://purl.bioontology.org/ontology/DRON/> ; | ||
| ogit:contextId 18 ; | ||
| dcterms:source "AdaWorldAPI/MedCare-rs/releases/tag/bioportal-ontologies-2026-05-05/dron.owl" ; | ||
| dcterms:license "CC-BY-3.0" ; | ||
| ogit:fileSize "701.7 MB" ; | ||
| ogit:tripleCount "~3M (estimate)" ; | ||
| ogit:loaderCrate "lance-graph-rdf" ; | ||
| ogit:loaderStatus "stub" . |
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| @prefix ogit: <http://www.purl.org/ogit/> . | ||
| @prefix ogit.Medical: <http://www.purl.org/ogit/Medical/> . | ||
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | ||
| @prefix dcterms: <http://purl.org/dc/terms/> . | ||
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| ogit.Medical:FMA | ||
| a ogit:Namespace ; | ||
| rdfs:label "Foundational Model of Anatomy" ; | ||
| rdfs:comment "Reference ontology of canonical human anatomy covering structural relationships among body parts, organs, tissues, and cells, authored by the University of Washington." ; | ||
| ogit:contextIri <http://purl.bioontology.org/ontology/FMA/> ; | ||
| ogit:contextId 13 ; | ||
| dcterms:source "AdaWorldAPI/MedCare-rs/releases/tag/bioportal-ontologies-2026-05-05/fma.owl" ; | ||
| dcterms:license "CC-BY-3.0" ; | ||
| ogit:fileSize "266.2 MB" ; | ||
| ogit:tripleCount "~1.5M (estimate)" ; | ||
| ogit:loaderCrate "lance-graph-rdf" ; | ||
| ogit:loaderStatus "stub" . |
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| @prefix ogit: <http://www.purl.org/ogit/> . | ||
| @prefix ogit.Medical: <http://www.purl.org/ogit/Medical/> . | ||
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | ||
| @prefix dcterms: <http://purl.org/dc/terms/> . | ||
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| ogit.Medical:HPO | ||
| a ogit:Namespace ; | ||
| rdfs:label "Human Phenotype Ontology" ; | ||
| rdfs:comment "Standardized vocabulary of phenotypic abnormalities encountered in human disease, used for deep phenotyping in rare-disease diagnostics and genomic medicine." ; | ||
| ogit:contextIri <http://purl.bioontology.org/ontology/HP/> ; | ||
| ogit:contextId 17 ; | ||
| dcterms:source "AdaWorldAPI/MedCare-rs/releases/tag/bioportal-ontologies-2026-05-05/hp.obo" ; | ||
| dcterms:license "HPO-License" ; | ||
| ogit:fileSize "10.7 MB" ; | ||
| ogit:tripleCount "~150K (estimate)" ; | ||
| ogit:loaderCrate "lance-graph-rdf" ; | ||
| ogit:loaderStatus "stub" . | ||
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| @prefix ogit: <http://www.purl.org/ogit/> . | ||
| @prefix ogit.Medical: <http://www.purl.org/ogit/Medical/> . | ||
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | ||
| @prefix dcterms: <http://purl.org/dc/terms/> . | ||
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| ogit.Medical:ICD10CM | ||
| a ogit:Namespace ; | ||
| rdfs:label "ICD-10 Clinical Modification" ; | ||
| rdfs:comment "U.S. clinical modification of WHO ICD-10 used for diagnosis coding in healthcare billing, encounters, and population health reporting." ; | ||
| ogit:contextIri <http://purl.bioontology.org/ontology/ICD10CM/> ; | ||
| ogit:contextId 10 ; | ||
| dcterms:source "AdaWorldAPI/MedCare-rs/releases/tag/bioportal-ontologies-2026-05-05/ICD10CM.ttl" ; | ||
| dcterms:license "UMLS-Metathesaurus" ; | ||
| ogit:fileSize "51.6 MB" ; | ||
| ogit:tripleCount "~1.8M (estimate)" ; | ||
| ogit:loaderCrate "lance-graph-rdf" ; | ||
| ogit:loaderStatus "stub" . |
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| @prefix ogit: <http://www.purl.org/ogit/> . | ||
| @prefix ogit.Medical: <http://www.purl.org/ogit/Medical/> . | ||
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | ||
| @prefix dcterms: <http://purl.org/dc/terms/> . | ||
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| ogit.Medical:LOINC | ||
| a ogit:Namespace ; | ||
| rdfs:label "Logical Observation Identifiers Names and Codes" ; | ||
| rdfs:comment "Universal code system for identifying laboratory and clinical observations such as lab tests, vital signs, and survey instruments, maintained by the Regenstrief Institute." ; | ||
| ogit:contextIri <http://purl.bioontology.org/ontology/LOINC/> ; | ||
| ogit:contextId 12 ; | ||
| dcterms:source "AdaWorldAPI/MedCare-rs/releases/tag/bioportal-ontologies-2026-05-05/LOINC.ttl" ; | ||
| dcterms:license "LOINC-License" ; | ||
| ogit:fileSize "739.2 MB" ; | ||
| ogit:tripleCount "~30M (estimate)" ; | ||
| ogit:loaderCrate "lance-graph-rdf" ; | ||
| ogit:loaderStatus "stub" . |
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| @prefix ogit: <http://www.purl.org/ogit/> . | ||
| @prefix ogit.Medical: <http://www.purl.org/ogit/Medical/> . | ||
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | ||
| @prefix dcterms: <http://purl.org/dc/terms/> . | ||
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| ogit.Medical:MONDO | ||
| a ogit:Namespace ; | ||
| rdfs:label "Mondo Disease Ontology" ; | ||
| rdfs:comment "Unified disease ontology that harmonizes terms across DOID, OMIM, Orphanet, ICD, MeSH, and NCIt to provide cross-walked disease concepts for translational research." ; | ||
| ogit:contextIri <http://purl.bioontology.org/ontology/MONDO/> ; | ||
| ogit:contextId 16 ; | ||
| dcterms:source "AdaWorldAPI/MedCare-rs/releases/tag/bioportal-ontologies-2026-05-05/mondo-simple.owl" ; | ||
| dcterms:license "CC-BY-4.0" ; | ||
| ogit:fileSize "215.5 MB" ; | ||
| ogit:tripleCount "~1.2M (estimate)" ; | ||
| ogit:loaderCrate "lance-graph-rdf" ; | ||
| ogit:loaderStatus "stub" . |
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| @prefix ogit: <http://www.purl.org/ogit/> . | ||
| @prefix ogit.Medical: <http://www.purl.org/ogit/Medical/> . | ||
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | ||
| @prefix dcterms: <http://purl.org/dc/terms/> . | ||
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| ogit.Medical:RadLex | ||
| a ogit:Namespace ; | ||
| rdfs:label "RadLex Radiology Lexicon" ; | ||
| rdfs:comment "Controlled terminology for radiology covering imaging modalities, anatomy, observations, and procedures, maintained by the Radiological Society of North America." ; | ||
| ogit:contextIri <http://purl.bioontology.org/ontology/RADLEX/> ; | ||
| ogit:contextId 14 ; | ||
| dcterms:source "AdaWorldAPI/MedCare-rs/releases/tag/bioportal-ontologies-2026-05-05/RadLex.owl" ; | ||
| dcterms:license "RadLex-Free" ; | ||
| ogit:fileSize "64.9 MB" ; | ||
| ogit:tripleCount "~600K (estimate)" ; | ||
| ogit:loaderCrate "lance-graph-rdf" ; | ||
| ogit:loaderStatus "stub" . |
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| @prefix ogit: <http://www.purl.org/ogit/> . | ||
| @prefix ogit.Medical: <http://www.purl.org/ogit/Medical/> . | ||
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | ||
| @prefix dcterms: <http://purl.org/dc/terms/> . | ||
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| ogit.Medical:RxNorm | ||
| a ogit:Namespace ; | ||
| rdfs:label "RxNorm Normalized Drug Names" ; | ||
| rdfs:comment "Standardized vocabulary of clinical drugs published by the U.S. National Library of Medicine, mapping ingredients, strengths, dose forms, and brand names to normalized concepts." ; | ||
| ogit:contextIri <http://purl.bioontology.org/ontology/RXNORM/> ; | ||
| ogit:contextId 11 ; | ||
| dcterms:source "AdaWorldAPI/MedCare-rs/releases/tag/bioportal-ontologies-2026-05-05/RXNORM.ttl" ; | ||
| dcterms:license "UMLS-Metathesaurus" ; | ||
| ogit:fileSize "218.8 MB" ; | ||
| ogit:tripleCount "~9M (estimate)" ; | ||
| ogit:loaderCrate "lance-graph-rdf" ; | ||
| ogit:loaderStatus "stub" . |
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| @prefix ogit: <http://www.purl.org/ogit/> . | ||
| @prefix ogit.Medical: <http://www.purl.org/ogit/Medical/> . | ||
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | ||
| @prefix dcterms: <http://purl.org/dc/terms/> . | ||
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| ogit.Medical:SNOMED | ||
| a ogit:Namespace ; | ||
| rdfs:label "SNOMED CT (partial: SCTO upper-level)" ; | ||
| rdfs:comment "Systematized Nomenclature of Medicine Clinical Terms — comprehensive clinical terminology spanning findings, disorders, procedures, and observable entities; this stub references the SCTO upper-level partial pending affiliate-licensed full ingestion." ; | ||
| ogit:contextIri <http://purl.bioontology.org/ontology/SNOMEDCT/> ; | ||
| ogit:contextId 15 ; | ||
| dcterms:source "AdaWorldAPI/MedCare-rs/releases/tag/bioportal-ontologies-2026-05-05/SCTO.owl" ; | ||
| dcterms:license "SNOMED-Affiliate" ; | ||
| ogit:fileSize "666 KB" ; | ||
| ogit:tripleCount "~50K (partial estimate)" ; | ||
| ogit:loaderCrate "lance-graph-rdf" ; | ||
| ogit:loaderStatus "stub" . |
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| @prefix ogit: <http://www.purl.org/ogit/> . | ||
| @prefix ogit.Medical: <http://www.purl.org/ogit/Medical/> . | ||
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | ||
| @prefix dcterms: <http://purl.org/dc/terms/> . | ||
| @prefix xsd: <http://www.w3.org/2001/XMLSchema#> . | ||
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| ogit.Medical:GlobMailsmtp | ||
| a rdfs:Class ; | ||
| rdfs:subClassOf ogit:Entity ; | ||
| rdfs:label "GlobMailsmtp" ; | ||
| rdfs:comment "Global SMTP configuration: outbound mail-server credentials (name, mail, login, password, port, ssl, host) used by the clinic for patient and referral correspondence." ; | ||
| dcterms:source "AdaWorldAPI/MedCare-rs/.MYSQL/Struktur.sql:glob_mailsmtp" ; | ||
| ogit:scope "NTO" ; | ||
| ogit:parent ogit:Node ; | ||
| ogit:loaderStatus "stub" ; | ||
| ogit:columnCount 8 ; | ||
| ogit:primaryKey "id" ; | ||
| ogit:mysqlTable "glob_mailsmtp" . |
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| @prefix ogit: <http://www.purl.org/ogit/> . | ||
| @prefix ogit.Medical: <http://www.purl.org/ogit/Medical/> . | ||
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | ||
| @prefix dcterms: <http://purl.org/dc/terms/> . | ||
| @prefix xsd: <http://www.w3.org/2001/XMLSchema#> . | ||
|
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| ogit.Medical:GlobUserRight | ||
| a rdfs:Class ; | ||
| rdfs:subClassOf ogit:Entity ; | ||
| rdfs:label "GlobUserRight" ; | ||
| rdfs:comment "Global permission catalog: a single named right (bereich) with multilingual labels (de/en/fr/sp) and a visible-right text used to bind RBAC permissions to staff." ; | ||
| dcterms:source "AdaWorldAPI/MedCare-rs/.MYSQL/Struktur.sql:glob_user_right" ; | ||
| ogit:scope "NTO" ; | ||
| ogit:parent ogit:Node ; | ||
| ogit:loaderStatus "stub" ; | ||
| ogit:columnCount 7 ; | ||
| ogit:primaryKey "id" ; | ||
| ogit:mysqlTable "glob_user_right" . |
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| @prefix ogit: <http://www.purl.org/ogit/> . | ||
| @prefix ogit.Medical: <http://www.purl.org/ogit/Medical/> . | ||
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | ||
| @prefix dcterms: <http://purl.org/dc/terms/> . | ||
| @prefix xsd: <http://www.w3.org/2001/XMLSchema#> . | ||
|
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| ogit.Medical:GlobVitalMod | ||
| a rdfs:Class ; | ||
| rdfs:subClassOf ogit:Entity ; | ||
| rdfs:label "GlobVitalMod" ; | ||
| rdfs:comment "Global vital-sign module configuration: defines up to 8 dynamic vital channels (name, unit, mask, active flag), multilingual checklists, owning office right, and multilingual headers for custom vital-capture forms." ; | ||
| dcterms:source "AdaWorldAPI/MedCare-rs/.MYSQL/Struktur.sql:glob_vital_mod" ; | ||
| ogit:scope "NTO" ; | ||
| ogit:parent ogit:Node ; | ||
| ogit:loaderStatus "stub" ; | ||
| ogit:columnCount 42 ; | ||
| ogit:primaryKey "id" ; | ||
| ogit:mysqlTable "glob_vital_mod" . |
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| @prefix ogit: <http://www.purl.org/ogit/> . | ||
| @prefix ogit.Medical: <http://www.purl.org/ogit/Medical/> . | ||
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | ||
| @prefix dcterms: <http://purl.org/dc/terms/> . | ||
| @prefix xsd: <http://www.w3.org/2001/XMLSchema#> . | ||
|
|
||
| ogit.Medical:PatAddexamination | ||
| a rdfs:Class ; | ||
| rdfs:subClassOf ogit:Entity ; | ||
| rdfs:label "PatAddexamination" ; | ||
| rdfs:comment "Per-patient additional-examination order: links a patient to a combo_addexamination type with file-counter progress, in-house flag, start date, and free-text notice." ; | ||
| dcterms:source "AdaWorldAPI/MedCare-rs/.MYSQL/Struktur.sql:pat_addexamination" ; | ||
| ogit:scope "NTO" ; | ||
| ogit:parent ogit:Node ; | ||
| ogit:loaderStatus "stub" ; | ||
| ogit:columnCount 16 ; | ||
| ogit:primaryKey "id" ; | ||
| ogit:mysqlTable "pat_addexamination" . |
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| @prefix ogit: <http://www.purl.org/ogit/> . | ||
| @prefix ogit.Medical: <http://www.purl.org/ogit/Medical/> . | ||
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | ||
| @prefix dcterms: <http://purl.org/dc/terms/> . | ||
| @prefix xsd: <http://www.w3.org/2001/XMLSchema#> . | ||
|
|
||
| ogit.Medical:PatAddtreatment | ||
| a rdfs:Class ; | ||
| rdfs:subClassOf ogit:Entity ; | ||
| rdfs:label "PatAddtreatment" ; | ||
| rdfs:comment "Per-patient additional-treatment order: links a patient to a combo_addtreatment type with file-counter progress, in-house flag, start date, and free-text notice." ; | ||
| dcterms:source "AdaWorldAPI/MedCare-rs/.MYSQL/Struktur.sql:pat_addtreatment" ; | ||
| ogit:scope "NTO" ; | ||
| ogit:parent ogit:Node ; | ||
| ogit:loaderStatus "stub" ; | ||
| ogit:columnCount 16 ; | ||
| ogit:primaryKey "id" ; | ||
| ogit:mysqlTable "pat_addtreatment" . |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,18 @@ | ||
| @prefix ogit: <http://www.purl.org/ogit/> . | ||
| @prefix ogit.Medical: <http://www.purl.org/ogit/Medical/> . | ||
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | ||
| @prefix dcterms: <http://purl.org/dc/terms/> . | ||
| @prefix xsd: <http://www.w3.org/2001/XMLSchema#> . | ||
|
|
||
| ogit.Medical:PatMedication | ||
| a rdfs:Class ; | ||
| rdfs:subClassOf ogit:Entity ; | ||
| rdfs:label "PatMedication" ; | ||
| rdfs:comment "Per-patient prescription record: drug identity (praepid + name), dose and unit, type, start/stop dates, interval, daily dose, and stop-reason for medication-list reconciliation." ; | ||
| dcterms:source "AdaWorldAPI/MedCare-rs/.MYSQL/Struktur.sql:pat_medication" ; | ||
| ogit:scope "NTO" ; | ||
| ogit:parent ogit:Node ; | ||
| ogit:loaderStatus "stub" ; | ||
| ogit:columnCount 24 ; | ||
| ogit:primaryKey "id" ; | ||
| ogit:mysqlTable "pat_medication" . |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,18 @@ | ||
| @prefix ogit: <http://www.purl.org/ogit/> . | ||
| @prefix ogit.Medical: <http://www.purl.org/ogit/Medical/> . | ||
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | ||
| @prefix dcterms: <http://purl.org/dc/terms/> . | ||
| @prefix xsd: <http://www.w3.org/2001/XMLSchema#> . | ||
|
|
||
| ogit.Medical:PatSpecialist | ||
| a rdfs:Class ; | ||
| rdfs:subClassOf ogit:Entity ; | ||
| rdfs:label "PatSpecialist" ; | ||
| rdfs:comment "Per-patient specialist referral: target specialty, doctor-letter requirement, sms/mail notification flags and audit, free-text notice, completion flag, and result-DB linkage." ; | ||
| dcterms:source "AdaWorldAPI/MedCare-rs/.MYSQL/Struktur.sql:pat_specialist" ; | ||
| ogit:scope "NTO" ; | ||
| ogit:parent ogit:Node ; | ||
| ogit:loaderStatus "stub" ; | ||
| ogit:columnCount 21 ; | ||
| ogit:primaryKey "id" ; | ||
| ogit:mysqlTable "pat_specialist" . |
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The pull_request validation workflow runs
./validate.sh; with these new namespace stubs it exits before parsing the rest because the validator derives the resource name from this subject and rejectsNTO/Medical/HPO/namespace.ttlasFile Name mismatch: namespace.ttl does not match with name: HPOandDirectory mismatch ... should be under directory Medical. The samenamespace.ttllayout is used for all 10 BioPortal stubs, so any PR including them will fail CI unless the files/IRIs are arranged the way the OGIT validator expects.Useful? React with 👍 / 👎.