This is a combination of 2 commits.

[PWGEM] Add new task for sanity check of EMCal cluster during different stages

- Add new task for sanity check of EMCal clusters and the connected MC infoation before skimming, after skimming and after (re)association of the McParticles to EmMcParticles.

Author: mhemmer-cern

PWGEM/PhotonMeson/Tasks/CMakeLists.txt

@@ -205,3 +205,8 @@ o2physics_add_dpl_workflow(emcal-photon-mc-task
                     SOURCES emcalPhotonMcTask.cxx
                     PUBLIC_LINK_LIBRARIES O2::Framework O2Physics::AnalysisCore O2Physics::PWGEMPhotonMesonCore
                     COMPONENT_NAME Analysis)
+
+o2physics_add_dpl_workflow(emcal-mc-sanity-check
+                    SOURCES emcalMcSanityCheck.cxx
+                    PUBLIC_LINK_LIBRARIES O2::Framework O2Physics::AnalysisCore
+                    COMPONENT_NAME Analysis)

PWGEM/PhotonMeson/Tasks/emcalMcSanityCheck.cxx

@@ -0,0 +1,269 @@
+// Copyright 2019-2020 CERN and copyright holders of ALICE O2.
+// See https://alice-o2.web.cern.ch/copyright for details of the copyright holders.
+// All rights not expressly granted are reserved.
+//
+// This software is distributed under the terms of the GNU General Public
+// License v3 (GPL Version 3), copied verbatim in the file "COPYING".
+//
+// In applying this license CERN does not waive the privileges and immunities
+// granted to it by virtue of its status as an Intergovernmental Organization
+// or submit itself to any jurisdiction.
+
+/// \file emcalMcSanityCheck.cxx
+/// \brief Task to test MC info for EMCal during different stages of out workflow
+/// \author M. Hemmer, marvin.hemmer@cern.ch
+
+#include "PWGEM/PhotonMeson/DataModel/GammaTablesRedux.h"
+#include "PWGEM/PhotonMeson/DataModel/gammaTables.h"
+#include "PWGEM/PhotonMeson/Utils/emcalHistoDefinitions.h"
+#include "PWGJE/DataModel/EMCALClusters.h"
+
+#include <Framework/ASoA.h>
+#include <Framework/AnalysisDataModel.h>
+#include <Framework/AnalysisTask.h>
+#include <Framework/Configurable.h>
+#include <Framework/HistogramRegistry.h>
+#include <Framework/HistogramSpec.h>
+#include <Framework/InitContext.h>
+#include <Framework/OutputObjHeader.h>
+#include <Framework/runDataProcessing.h>
+
+#include <TH1.h>
+
+#include <cmath>
+#include <cstddef>
+#include <cstdint>
+#include <limits>
+#include <string>
+#include <vector>
+
+using namespace o2;
+using namespace o2::aod;
+using namespace o2::framework;
+using namespace o2::framework::expressions;
+using namespace o2::soa;
+
+constexpr float TooLow = 0.9f;
+constexpr float TooHigh = 1.1f;
+
+// LSB from packing in MinClusters is 1 MeV
+constexpr float EnergyPackingLsb = 1.f / o2::aod::emcdownscaling::downscalingFactors[o2::aod::emcdownscaling::kEnergy];
+
+// Rounding error from packing should be half the LSB so 0.5 MeV
+constexpr float EnergyComparisonEpsilon = 0.5f * EnergyPackingLsb;
+
+// uint16_t saturates at 65535 so max value of energy for MinClusters should be 65.535 GeV
+constexpr float EnergyPackingSaturationValue = static_cast<float>(std::numeric_limits<uint16_t>::max()) * EnergyPackingLsb;
+
+enum class EnergyComparisonStatus : uint8_t {
+  Match = 0,    // agrees within half a packing LSB
+  Mismatch = 1, // disagrees beyond epsilon, and not explained by saturation
+  Saturated = 2 // reference energy exceeded the uint16_t packing range
+};
+
+enum class McParticleComparisonStatus : uint8_t {
+  Match = 0,       // same particle species, energy within epsilon, cluster fraction same
+  DiffSpecies = 1, // not the same species
+  DiffEnergy = 2,  // energy not within epsilon
+  DiffFraction = 3 // cluster fraction not within epsilon
+};
+
+enum class EnergyRatioStatus : uint8_t {
+  TooLow = 0,
+  Ok = 1,
+  TooHigh = 2
+};
+
+struct EmcalMcSanityCheck {
+
+  using BeforeSkimmerCluster = soa::Join<EMCALClusters, EMCALMCClusters>;
+  using AfterSkimmerCluster = soa::Join<MinClusters, EMCClusterMCLabels_001>;
+  using AfterAssociateCluster = soa::Join<MinClusters, EMEMCClusterMCLabels_001>;
+  using BeforeAfterAssociateCluster = soa::Join<MinClusters, EMCClusterMCLabels_001, EMEMCClusterMCLabels_001>;
+
+  HistogramRegistry registry{"registry", {}, OutputObjHandlingPolicy::AnalysisObject, false, false};
+
+  void init(InitContext&)
+  {
+    const AxisSpec axisParticleClusterFracRatioStatus{3, -0.5, 2.5};
+
+    auto hParticleClusterFracRatioStatus = registry.add<TH1>("BeforeSkimmer/hParticleClusterFracRatioStatus", "hParticleClusterFracRatioStatus;;counts", HistType::kTH1D, {axisParticleClusterFracRatioStatus});
+    hParticleClusterFracRatioStatus->GetXaxis()->SetBinLabel(1, "#it{E}_{part}/(frac#it{E}_{clus}) < 0.9");
+    hParticleClusterFracRatioStatus->GetXaxis()->SetBinLabel(2, "0.9 #leq #it{E}_{part}/(frac#it{E}_{clus}) < 1.1");
+    hParticleClusterFracRatioStatus->GetXaxis()->SetBinLabel(3, "#it{E}_{part}/(frac#it{E}_{clus}) > 1.1");
+
+    if (doprocessAfterSkimmer) {
+      registry.addClone("BeforeSkimmer/", "AfterSkimmer/");
+    }
+
+    if (doprocessAfterAssociation) {
+      registry.addClone("BeforeSkimmer/", "AfterAssociate/");
+    }
+
+    if (doprocessCompareBeforeAfterAssociate) {
+      auto hMcParticleStatus = registry.add<TH1>("hMcParticleStatus", "hMcParticleStatus;;counts", HistType::kTH1D, {{4, -0.5, 3.5}});
+      hMcParticleStatus->GetXaxis()->SetBinLabel(static_cast<int>(McParticleComparisonStatus::Match) + 1, "Match");
+      hMcParticleStatus->GetXaxis()->SetBinLabel(static_cast<int>(McParticleComparisonStatus::DiffSpecies) + 1, "DiffSpecies");
+      hMcParticleStatus->GetXaxis()->SetBinLabel(static_cast<int>(McParticleComparisonStatus::DiffEnergy) + 1, "DiffEnergy");
+      hMcParticleStatus->GetXaxis()->SetBinLabel(static_cast<int>(McParticleComparisonStatus::DiffFraction) + 1, "DiffFraction");
+    }
+  }; // end init
+
+  EnergyRatioStatus getEnergyRatioStatus(float clusterE, float mcParticleE, float frac)
+  {
+    float ratio = mcParticleE / (clusterE * frac);
+    if (TooLow <= ratio && ratio < TooHigh) {
+      return EnergyRatioStatus::Ok;
+    }
+    if (ratio < TooLow) {
+      return EnergyRatioStatus::TooLow;
+    }
+    // everything else now has to be TooHigh
+    return EnergyRatioStatus::TooHigh;
+  }
+
+  // referenceEnergy: full-precision energy (e.g. BeforeSkimmer's cluster.energy()).
+  // compressedEnergy: energy unpacked from a uint16_t-packed table (e.g. MinClusters' cluster.e()).
+  EnergyComparisonStatus compareClusterEnergy(float referenceEnergy, float compressedEnergy)
+  {
+    if (referenceEnergy > EnergyPackingSaturationValue) {
+      return EnergyComparisonStatus::Saturated;
+    }
+    return std::abs(referenceEnergy - compressedEnergy) <= EnergyComparisonEpsilon
+             ? EnergyComparisonStatus::Match
+             : EnergyComparisonStatus::Mismatch;
+  }
+
+  void processBeforeSkimmer(BeforeSkimmerCluster const& clusters, McParticles_001 const& mcParticles)
+  {
+    if (clusters.size() == 0 || mcParticles.size() == 0) {
+      return;
+    }
+    auto mcParticle = mcParticles.begin();
+
+    for (const auto& cluster : clusters) {
+      if (!cluster.has_mcParticle()) {
+        continue;
+      }
+      const auto& ids = cluster.mcParticleIds();
+      const auto& fracs = cluster.amplitudeA();
+      for (std::size_t i = 0; i < ids.size(); ++i) {
+        const auto& id = ids[i];
+        const auto& frac = fracs[i];
+        mcParticle.setCursor(id);
+        registry.fill(HIST("BeforeSkimmer/hParticleClusterFracRatioStatus"), static_cast<int>(getEnergyRatioStatus(cluster.energy(), mcParticle.e(), frac)));
+      }
+    }
+  }
+  PROCESS_SWITCH(EmcalMcSanityCheck, processBeforeSkimmer, "Process EMCal cluster information before the skimmerGammaCalo", true);
+
+  void processAfterSkimmer(AfterSkimmerCluster const& clusters, McParticles_001 const& mcParticles)
+  {
+    if (clusters.size() == 0 || mcParticles.size() == 0) {
+      return;
+    }
+    auto mcParticle = mcParticles.begin();
+
+    for (const auto& cluster : clusters) {
+      if (!cluster.has_mcParticle()) {
+        continue;
+      }
+      const auto& ids = cluster.mcParticleIds();
+      const auto& fracs = cluster.amplitude();
+      for (std::size_t i = 0; i < ids.size(); ++i) {
+        const auto& id = ids[i];
+        const auto& frac = fracs[i];
+        mcParticle.setCursor(id);
+        registry.fill(HIST("AfterSkimmer/hParticleClusterFracRatioStatus"), static_cast<int>(getEnergyRatioStatus(cluster.e(), mcParticle.e(), frac)));
+      }
+    }
+  }
+  PROCESS_SWITCH(EmcalMcSanityCheck, processAfterSkimmer, "Process EMCal cluster information after the skimmerGammaCalo", true);
+
+  void processAfterAssociation(AfterAssociateCluster const& clusters, EMMCParticles_001 const& mcParticles)
+  {
+    if (clusters.size() == 0 || mcParticles.size() == 0) {
+      return;
+    }
+    auto mcParticle = mcParticles.begin();
+
+    for (const auto& cluster : clusters) {
+      if (!cluster.has_emmcparticle()) {
+        continue;
+      }
+      const auto& ids = cluster.emmcparticleIds();
+      const auto& fracs = cluster.amplitude();
+      for (std::size_t i = 0; i < ids.size(); ++i) {
+        const auto& id = ids[i];
+        const auto& frac = fracs[i];
+        mcParticle.setCursor(id);
+        registry.fill(HIST("AfterAssociate/hParticleClusterFracRatioStatus"), static_cast<int>(getEnergyRatioStatus(cluster.e(), mcParticle.e(), frac)));
+      }
+    }
+  }
+  PROCESS_SWITCH(EmcalMcSanityCheck, processAfterAssociation, "Process EMCal cluster information before the associateMCinfoPhoton", false);
+
+  void processCompareBeforeAfterAssociate(MinClusters const& clusters,
+                                          EMCClusterMCLabels_001 const& beforeLabels,
+                                          EMEMCClusterMCLabels_001 const& afterLabels,
+                                          McParticles_001 const& mcParticles,
+                                          EMMCParticles_001 const& emMcParticles)
+  {
+    if (clusters.size() == 0 || mcParticles.size() == 0 || emMcParticles.size() == 0) {
+      return;
+    }
+
+    auto mcParticle = mcParticles.begin();
+    auto emMcParticle = emMcParticles.begin();
+
+    for (int64_t i = 0; i < clusters.size(); ++i) {
+      auto before = beforeLabels.iteratorAt(i);
+      auto after = afterLabels.iteratorAt(i);
+
+      if (!after.has_emmcparticle() || !before.has_mcParticle()) {
+        continue;
+      }
+
+      if (after.emmcparticleIds().size() != before.mcParticleIds().size()) {
+        LOG(fatal) << "Number of EmMcParticles and McParticles does not match (" << after.emmcparticleIds().size() << " vs " << before.mcParticleIds().size() << ")";
+      }
+      for (size_t id = 0; id < after.emmcparticleIds().size(); ++id) {
+        bool isSameSpecies = true;
+        bool isSameEnergy = true;
+        bool hasSameFraction = true;
+
+        mcParticle.setCursor(before.mcParticleIds()[id]);
+        emMcParticle.setCursor(after.emmcparticleIds()[id]);
+
+        if (mcParticle.pdgCode() != emMcParticle.pdgCode()) {
+          isSameSpecies = false;
+        }
+        if (mcParticle.e() != emMcParticle.e()) {
+          isSameEnergy = false;
+        }
+        if (before.amplitude()[id] != after.amplitude()[id]) {
+          hasSameFraction = false;
+        }
+
+        if (isSameSpecies && isSameEnergy && hasSameFraction) {
+          registry.fill(HIST("hMcParticleStatus"), 0);
+        }
+        if (!isSameSpecies) {
+          registry.fill(HIST("hMcParticleStatus"), 1);
+        }
+        if (!isSameEnergy) {
+          registry.fill(HIST("hMcParticleStatus"), 2);
+        }
+        if (!hasSameFraction) {
+          registry.fill(HIST("hMcParticleStatus"), 3);
+        }
+      }
+    }
+  }
+  PROCESS_SWITCH(EmcalMcSanityCheck, processCompareBeforeAfterAssociate, "Process and compare EMCal cluster and McParticle information before and after the associateMCinfoPhoton", false);
+}; // End struct EmcalMcSanityCheck
+
+WorkflowSpec defineDataProcessing(ConfigContext const& context)
+{
+  return WorkflowSpec{adaptAnalysisTask<EmcalMcSanityCheck>(context)};
+}