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VISCfunctions 1.3.1

  • Report loaded and attached packages in package reproducibility table (#132)
  • Report nodename in platform reproducibility table (#121)
  • Add B cell example dataset from G001 flow and sequencing file (#108)
  • Maintenance of package and CI (#114, #116, #124)
  • VISCfunctions now depends on R >= 4.1.0 (#134)
  • Auto-generate VISCfunctions pkgdown website with GitHub Actions (#119)

VISCfunctions 1.3.0

  • Fix bug in pairwise_test_bin() and pairwise_test_cont() (#111)
  • Add option to show library path in packages reproducibility table (#107)
  • Maintenance of package and CI (#110, #107)

VISCfunctions 1.2.4

  • Suppress warning from get_full_name() when fragile ldapsearch system call fails on Linux and macOS (#96)

VISCfunctions 1.2.3

  • Use shorter git hash in reproducibility table (#92)
  • Update t-test syntax in unit test expectations to avoid new error message introduced in R >= 4.4 (#89)
  • Update instructions for installing vignettes with dependencies (#94)
  • Update CI (#91)

VISCfunctions 1.2.2

  • Fixed bug in pairwise_test_cont() to properly catch paired comparisons where no paired data points exist.
  • Updated get_session_info() test to account for changes in sessioninfo::session_info()
  • Removed car dependency

VISCfunctions 1.2.1

  • pairwise_test_cor() is now named cor_test_pairs(). The function cor_test_pairs() now returns a data.frame with information on any ties in each variable instead of number of unique values.

VISCfunctions 1.2.0

  • New Functions:
    • cor_test() for testing between two continuous variable
    • cor_test_pairs() for group pairwise correlation testing (i.e. correlating values between all combinations antigens)
    • create_step_curve() function for survival curves and other step curves
    • mb_results() for Magnitude Breadth curves and calculating Area under the MB curve
    • trapz_sorted() for Trapezoidal Integration of messy data
    • collapse_group_row() for an alternative to kableExtra::collapse_rows() on long tables
    • binom_ci() to supersede wilson_ci()
  • Minor Changes:
    • Update README file and add NEWS, CONTRIBUTING, and CONDUCT files
    • Remove do() examples
    • Add geometric mean/median ability in pairwise_test_cont()
    • Updated Overview vignette with all additions and changes
  • Bug fixes:
    • Fixed issue where two_samp_bin_test() could give p>1
    • Fixed issue with reproducibility tables in Mac

VISCfunctions 1.1.4

  • Minor change to remove devtools dependency

VISCfunctions 1.1.3

  • New Functions:
    • escape() to easily make latex friendly columns with \ in front of special characters
    • wilson_ci() function for Wilson Confident Intervals
    • pariwise_test_bin() for pairwise binary testing comparisons (i.e. pairwise group differences in response rates)
  • Minor Changes:
    • Adding suffix param to stat_paste(). Now easy to add % or something else after each stat, if needed
    • Improved documentation and minor fixes to two_samp_cont_test()
    • Added vignette for overview of package

VISCfunctions 1.1.2

  • New Functions:
    • get_full_name() and get_session_info() for supplemental tables in reports
  • Minor Changes:
    • round_away_0() allows completely NA vectors
    • pretty_pvalues() now has for "latex", "pandoc", "html", and "no_markup" output options
  • Bug fixes:
    • two_samp_bin_test(): Barnard Test now run correctly
    • Change in output type in pvalue() from coin package addressed
    • Fix versioning to common three digit method

VISCfunctions 1.0/1.1

Initial Package Development