Removed unused var.

viklund · viklund · commit 1f7da1f40bf9 · 2017-04-04T16:27:57.000+02:00
diff --git a/main.nf b/main.nf
@@ -170,7 +170,6 @@ process artifact_mask_vcfs {
 
     """
     BNAME=\$( echo $svfile | cut -d. -f1 )
-    MASK_FILE=\${BNAME}_artifact_masked.vcf
     MASK_DIR=$params.mask_dirs.masks_artifacts
 
     # We don't want to change the filename in this process so we copy the
