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feat: Phase 1 — mirror JIT likelihood profiling scripts #2

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Merged
Jammy2211 merged 1 commit into from
May 16, 2026
Merged

feat: Phase 1 — mirror JIT likelihood profiling scripts #2

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23 changes: 23 additions & 0 deletions .gitignore
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Expand Up @@ -23,3 +23,26 @@ __jax_cache__/
# Local virtualenvs
.venv/
venv/

# Auto-simulated input datasets — regenerated by profiler scripts, not committed.
# The pre-existing datasets (e.g. imaging/hst, interferometer/sma, point_source/simple/*.json)
# remain tracked and are NOT covered by these rules.
dataset/cluster/
dataset/group/
dataset/multi/
dataset/imaging/simple/
dataset/interferometer/simple/
dataset/point_source/simple/data.fits
dataset/point_source/simple/noise_map.fits
dataset/point_source/simple/psf.fits
dataset/point_source/simple/point_dataset_positions_only.csv

# Datacube simulator outputs — regenerated each run
dataset/datacube/sim_*/

# Profiling result artifacts — written by scripts under likelihood/, simulators/, searches/.
# Each run produces fresh versioned JSON+PNG; Phase 4's dashboard will explicitly select
# which artifacts to commit. Until then, results stay local.
results/likelihood/
results/simulators/
results/searches/
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110 changes: 110 additions & 0 deletions dataset/imaging/hst/tracer.json
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{
"type": "instance",
"class_path": "autolens.lens.tracer.Tracer",
"arguments": {
"galaxies": {
"type": "list",
"values": [
{
"type": "instance",
"class_path": "autogalaxy.galaxy.galaxy.Galaxy",
"arguments": {
"redshift": 0.5,
"label": null,
"bulge": {
"type": "instance",
"class_path": "autogalaxy.profiles.light.standard.sersic.Sersic",
"arguments": {
"intensity": 2.0,
"ell_comps": {
"type": "tuple",
"values": [
0.05263157894736841,
3.2227547345982974e-18
]
},
"centre": {
"type": "tuple",
"values": [
0.0,
0.0
]
},
"sersic_index": 3.0,
"effective_radius": 0.6
}
},
"mass": {
"type": "instance",
"class_path": "autogalaxy.profiles.mass.total.isothermal.Isothermal",
"arguments": {
"ell_comps": {
"type": "tuple",
"values": [
0.05263157894736841,
3.2227547345982974e-18
]
},
"centre": {
"type": "tuple",
"values": [
0.0,
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]
},
"einstein_radius": 1.6
}
},
"shear": {
"type": "instance",
"class_path": "autogalaxy.profiles.mass.sheets.external_shear.ExternalShear",
"arguments": {
"gamma_2": 0.05,
"gamma_1": 0.05
}
}
}
},
{
"type": "instance",
"class_path": "autogalaxy.galaxy.galaxy.Galaxy",
"arguments": {
"redshift": 1.0,
"label": null,
"bulge": {
"type": "instance",
"class_path": "autogalaxy.profiles.light.standard.sersic_core.SersicCore",
"arguments": {
"intensity": 4.0,
"gamma": 0.25,
"ell_comps": {
"type": "tuple",
"values": [
0.0962250448649376,
-0.05555555555555551
]
},
"centre": {
"type": "tuple",
"values": [
0.0,
0.0
]
},
"sersic_index": 1.0,
"effective_radius": 0.1,
"alpha": 3.0,
"radius_break": 0.025
}
}
}
}
]
},
"cosmology": {
"type": "instance",
"class_path": "autogalaxy.cosmology.model.Planck15",
"arguments": {}
}
}
}
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20 changes: 20 additions & 0 deletions dataset/interferometer/sma/positions.json
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{
"type": "instance",
"class_path": "autoarray.structures.grids.irregular_2d.Grid2DIrregular",
"arguments": {
"values": {
"type": "ndarray",
"array": [
[
-1.35078125,
-0.505632540438727
],
[
0.77734375,
1.6648436277960226
]
],
"dtype": "float64"
}
}
}
111 changes: 111 additions & 0 deletions dataset/interferometer/sma/tracer.json
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@@ -0,0 +1,111 @@
{
"type": "instance",
"class_path": "autolens.lens.tracer.Tracer",
"arguments": {
"cosmology": {
"type": "instance",
"class_path": "autogalaxy.cosmology.model.Planck15",
"arguments": {}
},
"galaxies": {
"type": "list",
"values": [
{
"type": "instance",
"class_path": "autogalaxy.galaxy.galaxy.Galaxy",
"arguments": {
"label": null,
"redshift": 0.5,
"mass": {
"type": "instance",
"class_path": "autogalaxy.profiles.mass.total.isothermal.Isothermal",
"arguments": {
<<<<<<< Updated upstream
"einstein_radius": 1.6,
"centre": {
=======
"ell_comps": {
>>>>>>> Stashed changes
"type": "tuple",
"values": [
0.05263157894736841,
3.2227547345982974e-18
]
},
<<<<<<< Updated upstream
"ell_comps": {
=======
"centre": {
>>>>>>> Stashed changes
"type": "tuple",
"values": [
0.0,
0.0
]
},
"einstein_radius": 1.6
}
},
"shear": {
"type": "instance",
"class_path": "autogalaxy.profiles.mass.sheets.external_shear.ExternalShear",
"arguments": {
"gamma_1": 0.05,
"gamma_2": 0.05
}
}
}
},
{
"type": "instance",
"class_path": "autogalaxy.galaxy.galaxy.Galaxy",
"arguments": {
"label": null,
"redshift": 1.0,
"bulge": {
"type": "instance",
"class_path": "autogalaxy.profiles.light.standard.sersic_core.SersicCore",
"arguments": {
"alpha": 3.0,
<<<<<<< Updated upstream
"gamma": 0.25,
"effective_radius": 1.0,
"centre": {
=======
"intensity": 0.3,
"gamma": 0.25,
"radius_break": 0.025,
"ell_comps": {
>>>>>>> Stashed changes
"type": "tuple",
"values": [
0.1,
0.1
]
},
<<<<<<< Updated upstream
"intensity": 0.3,
"radius_break": 0.025,
"ell_comps": {
=======
"centre": {
>>>>>>> Stashed changes
"type": "tuple",
"values": [
0.0962250448649376,
-0.05555555555555551
]
},
<<<<<<< Updated upstream
=======
"effective_radius": 1.0,
>>>>>>> Stashed changes
"sersic_index": 2.5
}
}
}
}
]
}
}
}
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56 changes: 56 additions & 0 deletions dataset/point_source/simple/point_dataset_positions_only.json
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{
"type": "instance",
"class_path": "autolens.point.dataset.PointDataset",
"arguments": {
"positions_noise_map": {
"type": "instance",
"class_path": "autoarray.structures.arrays.irregular.ArrayIrregular",
"arguments": {
"values": {
"type": "ndarray",
"array": [
0.05,
0.05,
0.05,
0.05
],
"dtype": "float64"
}
}
},
"fluxes": null,
"time_delays_noise_map": null,
"time_delays": null,
"positions": {
"type": "instance",
"class_path": "autoarray.structures.grids.irregular_2d.Grid2DIrregular",
"arguments": {
"values": {
"type": "ndarray",
"array": [
[
-1.0285552366239088,
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],
[
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],
[
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],
[
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]
],
"dtype": "float64"
}
}
},
"name": "point_0",
"fluxes_noise_map": null,
"redshift": null
}
}
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