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‎pythonr/Dockerfile‎

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FROM ghcr.io/geocompx/python
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# Install R and locales
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# Fails on Debian (ubuntu PPA does not support Debian):
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# RUN wget https://raw.githubusercontent.com/rocker-org/rocker-versioned2/refs/heads/master/scripts/install_R_ppa.sh
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# RUN bash install_R_ppa.sh
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# bash -c "$(curl -L https://rstd.io/r-install)"
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# Install curl:
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RUN apt-get update && apt-get install -y --no-install-recommends \
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ca-certificates \
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libcurl4-openssl-dev \
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libssl-dev \
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libxml2-dev \
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libtcl8.6 \
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libtk8.6 \
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curl \
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locales \
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&& locale-gen C.UTF-8 \
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&& rm -rf /var/lib/apt/lists/*
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# Manual R installation: Download and install R DEB for Debian 12
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ARG R_VERSION=4.5.1
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RUN curl -O https://cdn.posit.co/r/debian-12/pkgs/r-${R_VERSION}_1_$(dpkg --print-architecture).deb && \
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apt-get update && \
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apt-get install -y --no-install-recommends ./r-${R_VERSION}_1_$(dpkg --print-architecture).deb && \
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rm r-${R_VERSION}_1_$(dpkg --print-architecture).deb
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ENV LANG=C.UTF-8
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ENV LC_ALL=C.UTF-8
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ENV PATH="/opt/R/${R_VERSION}/bin:${PATH}"
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ENV R_PKG_TYPE=binary
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RUN wget https://github.com/rocker-org/rocker-versioned2/raw/refs/heads/master/scripts/install_R_source.sh
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RUN bash install_R_source.sh
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RUN mkdir -p /etc/R && \
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echo "options(repos = c(CRAN = 'https://packagemanager.posit.co/cran/__linux__/bookworm/latest'))" > /etc/R/Rprofile.site && \
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mkdir -p /root && \
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echo "options(repos = c(CRAN = 'https://packagemanager.posit.co/cran/__linux__/bookworm/latest'))" > /root/.Rprofile
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RUN apt-get update && apt-get install -y --no-install-recommends \
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# rspatial deps:
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libgdal-dev \
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libproj-dev \
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libudunits2-dev \
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libspatialindex-dev \
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libabsl-dev \
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libgeos-dev \
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libsqlite3-dev \
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libtiff-dev \
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libjpeg-dev \
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libpng-dev \
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zlib1g-dev \
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libfontconfig1-dev \
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libfreetype6-dev \
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build-essential \
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libharfbuzz-dev \
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libfribidi-dev \
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libv8-dev \
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libmagick++-dev \
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cmake \
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&& rm -rf /var/lib/apt/lists/*
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# Install pak
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RUN R -e "options(repos = c(CRAN = 'https://packagemanager.posit.co/cran/__linux__/bookworm/latest')); install.packages('pak')"
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# # Install packages with pak (binaries from RSPM)
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# RUN Rscript -e "pak::pkg_install('sf')"
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# Install ragg and its dependencies for high-quality headless graphics
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RUN R -e "install.packages(c('ragg', 'systemfonts', 'textshaping'))"
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# RUN wget https://raw.githubusercontent.com/rocker-org/rocker-versioned2/refs/heads/master/scripts/setup_R.sh
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# RUN bash setup_R.sh
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# RUN wget https://github.com/rocker-org/rocker-versioned2/raw/refs/heads/master/scripts/install_R_source.sh
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# RUN bash install_R_source.sh
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# RUN apt-get update && apt-get install -y --no-install-recommends \
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# # rspatial deps:
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# libgdal-dev \
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# libproj-dev \
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# libudunits2-dev \
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# libspatialindex-dev \
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# libabsl-dev \
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# libgeos-dev \
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# libsqlite3-dev \
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# libtiff-dev \
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# libjpeg-dev \
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# libpng-dev \
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# zlib1g-dev \
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# libfontconfig1-dev \
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# libfreetype6-dev \
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# build-essential \
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# libharfbuzz-dev \
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# libfribidi-dev \
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# libv8-dev \
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# libmagick++-dev \
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# cmake \
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# && rm -rf /var/lib/apt/lists/*
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# # Install ragg and its dependencies for high-quality headless graphics
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# RUN R -e "install.packages(c('ragg', 'systemfonts', 'textshaping'))"
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# Configure R to use ragg as the default graphics device
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RUN mkdir -p /etc/R && \
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echo "options(repos = c(CRAN = 'https://cloud.r-project.org'))" > /etc/R/Rprofile.site && \
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echo "if (requireNamespace('ragg', quietly = TRUE)) { options(device = ragg::agg_png) }" >> /etc/R/Rprofile.site && \
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echo 'options(Ncpus = parallel::detectCores())' >> /etc/R/Rprofile.site
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# RUN mkdir -p /etc/R && \
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# echo "options(repos = c(CRAN = 'https://cloud.r-project.org'))" > /etc/R/Rprofile.site && \
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# echo "if (requireNamespace('ragg', quietly = TRUE)) { options(device = ragg::agg_png) }" >> /etc/R/Rprofile.site && \
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# echo 'options(Ncpus = parallel::detectCores())' >> /etc/R/Rprofile.site
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# Install sf:
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RUN R -e "install.packages('sf', repos = 'https://cloud.r-project.org')"
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# Install remotes for GitHub installs:
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RUN R -e "install.packages('remotes', repos = 'https://cloud.r-project.org')"
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# Install bookdown for book building:
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RUN R -e "install.packages('bookdown', repos = 'https://cloud.r-project.org')"
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# Install geocompx:
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RUN R -e "install.packages('geocompkg', repos = c('https://geocompx.r-universe.dev', 'https://cloud.r-project.org'), dependencies = TRUE, force = TRUE)"
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# # Install sf:
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# RUN R -e "install.packages('sf', repos = 'https://cloud.r-project.org')"
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# # Install remotes for GitHub installs:
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# RUN R -e "install.packages('remotes', repos = 'https://cloud.r-project.org')"
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# # Install bookdown for book building:
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# RUN R -e "install.packages('bookdown', repos = 'https://cloud.r-project.org')"
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# # Install geocompx:
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# RUN R -e "install.packages('geocompkg', repos = c('https://geocompx.r-universe.dev', 'https://cloud.r-project.org'), dependencies = TRUE, force = TRUE)"
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# # build the book
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# RUN wget https://github.com/geocompx/geocompr/archive/main.zip && \

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