Code to generate the figures in: Bronchopulmonary Dysplasia with Pulmonary Hypertension Associates with Loss of Semaphorin Signaling and Functional Decrease in FOXF1 Expression

This is the R and python code needed to repeat the analysis in the manuscript:

Bronchopulmonary Dysplasia with Pulmonary Hypertension Associates with Loss of Semaphorin Signaling and Functional Decrease in FOXF1 Expression

Shawyon P. Shirazi, Nicholas M. Negretti, Christopher S. Jetter, Alexandria L. Sharkey, Shriya Garg, Meghan Kapp, Devan Wilkins, Gabrielle Fortier, Saahithi Mallapragada, Nicholas E. Banovich, Christopher V. E. Wright, David B. Frank, Jonathan A. Kropski, Jennifer M. S. Sucre

bioRxiv 2024.08.27.609955; doi: https://doi.org/10.1101/2024.08.27.609955

An interactive data explorer can also be found here: https://lungcells.app.vumc.org

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R version 4.3.2 and python version 3.10.0 was used to run all of this code. The environment and session info are stored in environment_info.