name: phold_env
channels:
  - conda-forge
  - bioconda
  - defaults
dependencies:
  - foldseek ==10.941cd33
  - python >=3.8,<4
  - biopython >=1.80
  - alive-progress >=3.0.1
  - datasets >=2.15
  - requests >=2.25
  - pyarrow >=14.0.0
  - pandas >=1.4.2
  - loguru >=0.5.3
  - pyyaml >=6.0
  - click >=8.0.0
  - sentencepiece >=0.1.99
  - transformers >=4.34
  - pyrodigal-gv >=0.3.1
  - pytorch >=2.1.2
  - numpy >=1.20
  - pycirclize >=0.3.1
  - h5py >=3.5