Meeting protocol 05.09

[ehhartmann]

• grappa interaction
  • MD simulations for grappa and kimmdy needed to validate the software
  • maybe publish at the same time?
• publishing
  • authorship: first author shared between Jannik, Kai, Eric. Order will be decided by a friendly competition
  • paper could be much improved if we show that kimmdy is general -> polymer example, vWF bead example
• demonstration
  • nice
• applications
  • collagen-Japan project: either have interface for plumed.dat and get rates or also supply gromacs topology and get broken topology from proper kimmdy run
  • Vienna project: might take 2-3 weeks to get initial structure with AGE crosslinks. Try collagen kimmdy anyway to be prepared
• upcoming tasks
  • more polishing until next meeting
• next meeting: 06.10. 10am