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Added all dir. Added color profiles
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1,282 files changed

+1342727
-322001
lines changed

coreference/brat/11532192.ann

Lines changed: 6 additions & 6 deletions
Original file line numberDiff line numberDiff line change
@@ -203,8 +203,8 @@ T201 Noun_Phrase 4280 4288 Figure 1
203203
T202 Noun_Phrase 4318 4364 IOP between genetically distinct mouse strains
204204
T203 Noun_Phrase 4330 4364 genetically distinct mouse strains
205205
T204 Noun_Phrase 4351 4356 mouse
206-
T205 Noun_Phrase 4366 4380 Mean IOP SEM
207-
T206 IDENTITY_chain 4366 4380 Mean IOP SEM
206+
T205 Noun_Phrase 4366 4380 Mean IOP ± SEM
207+
T206 IDENTITY_chain 4366 4380 Mean IOP ± SEM
208208
T207 Noun_Phrase 4394 4405 each strain
209209
T208 Noun_Phrase 4394 4405 each strain
210210
T209 IDENTITY_chain 4394 4405 each strain
@@ -368,7 +368,7 @@ T366 Noun_Phrase 7816 7824 Figure 3
368368
T367 Noun_Phrase 7838 7855 different strains
369369
T368 IDENTITY_chain 7838 7855 different strains
370370
T369 Noun_Phrase 7889 7893 time
371-
T370 Noun_Phrase 7895 7909 Mean IOP SEM
371+
T370 Noun_Phrase 7895 7909 Mean IOP ± SEM
372372
T371 Noun_Phrase 7966 7977 measurement
373373
T372 IDENTITY_chain 7966 7977 measurement
374374
T373 Noun_Phrase 7983 7994 measurement
@@ -494,7 +494,7 @@ T492 Noun_Phrase 10641 10654 the same time
494494
T493 Noun_Phrase 10694 10700 Figure
495495
T494 Noun_Phrase 10694 10702 Figure 4
496496
T495 Noun_Phrase 10704 10707 IOP
497-
T496 Noun_Phrase 10738 10752 Mean IOP SEM
497+
T496 Noun_Phrase 10738 10752 Mean IOP ± SEM
498498
T497 Noun_Phrase 10806 10809 IOP
499499
T498 Noun_Phrase 10837 10844 strains
500500
T499 Noun_Phrase 10837 10844;10858 10865 strains 129P3/J
@@ -694,7 +694,7 @@ T692 Noun_Phrase 15466 15474 Figure 6
694694
T693 Noun_Phrase 15476 15479 IOP
695695
T694 Noun_Phrase 15500 15508;15527 15534 the dark periods
696696
T695 Noun_Phrase 15521 15534 light periods
697-
T696 Noun_Phrase 15556 15570 Mean IOP SEM
697+
T696 Noun_Phrase 15556 15570 Mean IOP ± SEM
698698
T697 Noun_Phrase 15564 15565
699699
T698 Noun_Phrase 15628 15637;15672 15690 the light periods of the day
700700
T699 Noun_Phrase 15639 15648 open bars
@@ -846,7 +846,7 @@ T844 IDENTITY_chain 18405 18413 Figure 9
846846
T845 Noun_Phrase 18426 18432 Figure
847847
T846 Noun_Phrase 18426 18434 Figure 9
848848
T847 Noun_Phrase 18447 18466 genetic alterations
849-
T848 Noun_Phrase 18469 18483 Mean IOP SEM
849+
T848 Noun_Phrase 18469 18483 Mean IOP ± SEM
850850
T849 Nonreferential_pronoun 18494 18499 There
851851
T850 Noun_Phrase 18537 18554 4 month old males
852852
T851 Noun_Phrase 18567 18580;18611 18623 the 129P2/Ola Y chromosome

coreference/brat/11597317.ann

Lines changed: 9 additions & 9 deletions
Original file line numberDiff line numberDiff line change
@@ -41,7 +41,7 @@ T39 Noun_Phrase 604 619 the two studies
4141
T40 Noun_Phrase 638 640 we
4242
T41 Noun_Phrase 679 681 we
4343
T42 Noun_Phrase 733 738 BRCA2
44-
T43 Noun_Phrase 742 763 RAD51mediated repair
44+
T43 Noun_Phrase 742 763 RAD51mediated repair
4545
T44 IDENTITY_chain 776 789 breast cancer
4646
T45 Noun_Phrase 776 789 breast cancer
4747
T46 Noun_Phrase 791 815 homologous recombination
@@ -304,14 +304,14 @@ T302 Noun_Phrase 9142 9145 its
304304
T303 Noun_Phrase 9236 9241 RAD51
305305
T304 Noun_Phrase 9276 9281 BRCA2
306306
T305 Noun_Phrase 9338 9345 CAPAN-1
307-
T306 Noun_Phrase 9378 9405 the RAD51BRCA2 interaction
307+
T306 Noun_Phrase 9378 9405 the RAD51BRCA2 interaction
308308
T307 Nonreferential_pronoun 9407 9409 it
309309
T308 Noun_Phrase 9456 9461 BRCA2
310310
T309 Noun_Phrase 9475 9488 recombination
311311
T310 Noun_Phrase 9538 9543 RAD51
312312
T311 Noun_Phrase 9583 9595 Davies et al
313313
T312 Noun_Phrase 9597 9599 26
314-
T313 Noun_Phrase 9610 9640 the association of RAD51BRCA2
314+
T313 Noun_Phrase 9610 9640 the association of RAD51BRCA2
315315
T314 Noun_Phrase 9665 9670 RAD51
316316
T315 Noun_Phrase 9744 9771 this interaction with BRCA2
317317
T316 Noun_Phrase 9766 9771 BRCA2
@@ -336,12 +336,12 @@ T334 Noun_Phrase 10405 10410 BRCA2
336336
T335 Noun_Phrase 10428 10433 RAD51
337337
T336 Noun_Phrase 10428 10442 RAD51 assembly
338338
T337 Noun_Phrase 10448 10470 recombinational repair
339-
T338 Noun_Phrase 10535 10558 RAD51BRCA2 interaction
339+
T338 Noun_Phrase 10535 10558 RAD51BRCA2 interaction
340340
T339 Noun_Phrase 10565 10571 damage
341341
T340 Noun_Phrase 10635 10640 RAD51
342342
T341 IDENTITY_chain 10644 10657 damaged sites
343343
T342 Noun_Phrase 10644 10657 damaged sites
344-
T343 Noun_Phrase 10738 10765 the RAD51BRCA2 interaction
344+
T343 Noun_Phrase 10738 10765 the RAD51BRCA2 interaction
345345
T344 Noun_Phrase 10790 10809 full-length protein
346346
T345 Noun_Phrase 10892 10897 BRCA2
347347
T346 Noun_Phrase 10972 11006 assembly of RAD51 at damaged sites
@@ -371,7 +371,7 @@ T369 Noun_Phrase 11542 11547 BRCA2
371371
T370 Noun_Phrase 11589 11602 recombination
372372
T371 Noun_Phrase 11612 11614 11
373373
T372 Nonreferential_pronoun 11627 11629 it
374-
T373 Noun_Phrase 11691 11718 the BRCA2RAD51 interaction
374+
T373 Noun_Phrase 11691 11718 the BRCA2RAD51 interaction
375375
T374 IDENTITY_chain 11728 11736 Figure 2
376376
T375 Noun_Phrase 11728 11736 Figure 2
377377
T376 Noun_Phrase 11765 11770 BRCA2
@@ -391,7 +391,7 @@ T389 Noun_Phrase 12321 12326 BRCA2
391391
T390 Noun_Phrase 12346 12369 biochemical experiments
392392
T391 IDENTITY_chain 12346 12369 biochemical experiments
393393
T392 Noun_Phrase 12402 12419 full-length BRCA2
394-
T393 Noun_Phrase 12439 12462 RAD51BRCA2 interaction
394+
T393 Noun_Phrase 12439 12462 RAD51BRCA2 interaction
395395
T394 Noun_Phrase 12464 12480 Such experiments
396396
T395 Noun_Phrase 12520 12525 BRCA2
397397
T396 Noun_Phrase 12529 12551 recombinational repair
@@ -423,8 +423,8 @@ T421 Noun_Phrase 13402 13412 DNA damage
423423
T422 Noun_Phrase 13467 13472 Rad51
424424
T423 Noun_Phrase 13494 13499 BRCA2
425425
T424 Noun_Phrase 13546 13549 DNA
426-
T425 Noun_Phrase 13564 13587 BRCA2Rad51 interaction
427-
T426 Noun_Phrase 13612 13636 RAD51BRCA2 interactions
426+
T425 Noun_Phrase 13564 13587 BRCA2Rad51 interaction
427+
T426 Noun_Phrase 13612 13636 RAD51BRCA2 interactions
428428
T427 Noun_Phrase 13643 13646 DNA
429429
T428 Noun_Phrase 13643 13653 DNA damage
430430
T429 Noun_Phrase 13671 13677 damage

coreference/brat/11897010.ann

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -352,8 +352,8 @@ T350 APPOS_relation 8074 8081 probe 2
352352
T351 Noun_Phrase 8074 8081 probe 2
353353
T352 Noun_Phrase 8083 8087 Fig.
354354
T353 Noun_Phrase 8083 8090 Fig. 1B
355-
T354 Noun_Phrase 8093 8100 ?-Actin
356-
T355 IDENTITY_chain 8093 8100 ?-Actin
355+
T354 Noun_Phrase 8093 8100 β-Actin
356+
T355 IDENTITY_chain 8093 8100 β-Actin
357357
T356 Noun_Phrase 8170 8207 the Mcoln1 alternative splice variant
358358
T357 Noun_Phrase 8174 8180 Mcoln1
359359
T358 Noun_Phrase 8231 8276 the coding sequence for the larger transcript
@@ -598,4 +598,4 @@ T596 Noun_Phrase 15959 15964 exons
598598
T597 Noun_Phrase 15959 15967 exons 12
599599
T598 Noun_Phrase 15980 15987 primers
600600
T599 Noun_Phrase 16103 16114 The filters
601-
T600 Noun_Phrase 16141 16148 ?-actin
601+
T600 Noun_Phrase 16141 16148 β-actin

coreference/brat/12079497.ann

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -180,8 +180,8 @@ T178 Noun_Phrase 4519 4523 ECFP
180180
T179 Noun_Phrase 4611 4614 GFP
181181
T180 Noun_Phrase 4624 4628 EYFP
182182
T181 Noun_Phrase 4734 4746 the proteins
183-
T182 Noun_Phrase 4936 5006 six anthozoan fluorescent proteins all having 2030% identity to wtGFP
184-
T183 IDENTITY_chain 4936 5006 six anthozoan fluorescent proteins all having 2030% identity to wtGFP
183+
T182 Noun_Phrase 4936 5006 six anthozoan fluorescent proteins all having 2030% identity to wtGFP
184+
T183 IDENTITY_chain 4936 5006 six anthozoan fluorescent proteins all having 2030% identity to wtGFP
185185
T184 Noun_Phrase 5001 5006 wtGFP
186186
T185 Noun_Phrase 5016 5021 these
187187
T186 Noun_Phrase 5023 5029 DsRed1

coreference/brat/12546709.ann

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -372,8 +372,8 @@ T370 Noun_Phrase 8320 8348 Statistical analyses on data
372372
T371 IDENTITY_chain 8320 8348 Statistical analyses on data
373373
T372 Noun_Phrase 8502 8521 Confocal microscopy
374374
T373 Noun_Phrase 8523 8529 Lenses
375-
T374 Noun_Phrase 8560 8646 100200 ?m thick sections along the optical (anterior to posterior) or equatorial axes
376-
T375 IDENTITY_chain 8560 8646 100200 ?m thick sections along the optical (anterior to posterior) or equatorial axes
375+
T374 Noun_Phrase 8560 8646 100200 μm thick sections along the optical (anterior to posterior) or equatorial axes
376+
T375 IDENTITY_chain 8560 8646 100200 μm thick sections along the optical (anterior to posterior) or equatorial axes
377377
T376 Noun_Phrase 8592 8626;8642 8646 the optical (anterior to posterior axes
378378
T377 Noun_Phrase 8631 8646 equatorial axes
379379
T378 Noun_Phrase 8648 8662 Thick sections

coreference/brat/12585968.ann

Lines changed: 11 additions & 11 deletions
Original file line numberDiff line numberDiff line change
@@ -388,8 +388,8 @@ T386 IDENTITY_chain 6969 6993 ventral cochlear nucleus
388388
T387 Noun_Phrase 6995 6997 VG
389389
T388 Noun_Phrase 6999 7018 vestibular ganglion
390390
T389 APPOS_relation 6999 7018 vestibular ganglion
391-
T390 Noun_Phrase 7034 7041 1000 ?m
392-
T391 IDENTITY_chain 7034 7041 1000 ?m
391+
T390 Noun_Phrase 7034 7041 1000 μm
392+
T391 IDENTITY_chain 7034 7041 1000 μm
393393
T392 Noun_Phrase 7053 7075 the Brn3c null mutants
394394
T393 Noun_Phrase 7057 7062 Brn3c
395395
T394 Noun_Phrase 7107 7115;7129 7135 afferent fibers
@@ -466,8 +466,8 @@ T464 APPOS_relation 8287 8316 intraganglionic spiral bundle
466466
T465 Noun_Phrase 8318 8322 IGSB
467467
T466 Noun_Phrase 8367 8375 controls
468468
T467 Noun_Phrase 8377 8378 e
469-
T468 Noun_Phrase 8395 8401 100 ?m
470-
T469 IDENTITY_chain 8395 8401 100 ?m
469+
T468 Noun_Phrase 8395 8401 100 μm
470+
T469 IDENTITY_chain 8395 8401 100 μm
471471
T470 Noun_Phrase 8474 8496 spiral sensory neurons
472472
T471 Noun_Phrase 8500 8502 P4
473473
T472 Noun_Phrase 8504 8507 our
@@ -603,8 +603,8 @@ T601 Noun_Phrase 11231 11266 acetylated tubulin immunoreactivity
603603
T602 Noun_Phrase 11242 11249 tubulin
604604
T603 Noun_Phrase 11268 11269 f
605605
T604 Noun_Phrase 11270 11271 g
606-
T605 Noun_Phrase 11288 11295 1000 ?m
607-
T606 Noun_Phrase 11302 11308 100 ?m
606+
T605 Noun_Phrase 11288 11295 1000 μm
607+
T606 Noun_Phrase 11302 11308 100 μm
608608
T607 Noun_Phrase 11333 11335 P8
609609
T608 Noun_Phrase 11397 11408 innervation
610610
T609 Noun_Phrase 11423 11457 all three rows of outer hair cells
@@ -794,7 +794,7 @@ T792 Noun_Phrase 14930 14948 the immature cells
794794
T793 Noun_Phrase 14955 14963 6 months
795795
T794 Noun_Phrase 14965 14966 h
796796
T795 Noun_Phrase 14976 14977 c
797-
T796 Noun_Phrase 14988 14994 100 ?m
797+
T796 Noun_Phrase 14988 14994 100 μm
798798
T797 Noun_Phrase 14997 15002 Table
799799
T798 Noun_Phrase 14997 15004 Table 1
800800
T799 IDENTITY_chain 14997 15004 Table 1
@@ -900,7 +900,7 @@ T898 Noun_Phrase 17507 17526 the efferent bundle
900900
T899 IDENTITY_chain 17507 17526 the efferent bundle
901901
T900 Noun_Phrase 17530 17532 it
902902
T901 Noun_Phrase 17544 17558 afferent fiber
903-
T902 Noun_Phrase 17580 17586 100 ?m
903+
T902 Noun_Phrase 17580 17586 100 μm
904904
T903 Noun_Phrase 17589 17616 6 months Brn3c null mutants
905905
T904 Noun_Phrase 17598 17603 Brn3c
906906
T905 Noun_Phrase 17635 17661 both afferent and efferent
@@ -974,7 +974,7 @@ T972 Noun_Phrase 18920 18921 d
974974
T973 Noun_Phrase 18927 18933 fibers
975975
T974 Noun_Phrase 18944 18962 the organ of Corti
976976
T975 Noun_Phrase 18969 18973 they
977-
T976 Noun_Phrase 19041 19047 100 ?m
977+
T976 Noun_Phrase 19041 19047 100 μm
978978
T977 Noun_Phrase 19050 19061 The cochlea
979979
T978 Noun_Phrase 19080 19088 the apex
980980
T979 Noun_Phrase 19132 19166 an interrupted inner spiral bundle
@@ -1115,7 +1115,7 @@ T1113 Noun_Phrase 21279 21283 NT-3
11151115
T1114 Noun_Phrase 21324 21331;21349 21360 control littermates
11161116
T1115 Noun_Phrase 21336 21341 Brn3c
11171117
T1116 Noun_Phrase 21336 21360 Brn3c mutant littermates
1118-
T1117 Noun_Phrase 21376 21382 100 ?m
1118+
T1117 Noun_Phrase 21376 21382 100 μm
11191119
T1118 Noun_Phrase 21388 21399 the saccule
11201120
T1119 Noun_Phrase 21401 21403 we
11211121
T1120 Noun_Phrase 21426 21430 BDNF
@@ -1237,7 +1237,7 @@ T1235 Noun_Phrase 22896 22911 control animals
12371237
T1236 Noun_Phrase 22913 22914 e
12381238
T1237 Noun_Phrase 22915 22916 f
12391239
T1238 Noun_Phrase 22918 22924 arrows
1240-
T1239 Noun_Phrase 22941 22947 100 ?m
1240+
T1239 Noun_Phrase 22941 22947 100 μm
12411241
T1240 Noun_Phrase 22962 22964 We
12421242
T1241 Noun_Phrase 23014 23053 the limited expression of neurotrophins
12431243
T1242 IDENTITY_chain 23014 23053 the limited expression of neurotrophins

coreference/brat/12925238.ann

Lines changed: 28 additions & 28 deletions
Original file line numberDiff line numberDiff line change
@@ -289,8 +289,8 @@ T287 IDENTITY_chain 7641 7662 human red blood cells
289289
T288 Noun_Phrase 7663 7669;7677 7689 the 47 kDa isoforms
290290
T289 Noun_Phrase 7663 7689 the 47 and 51 kDa isoforms
291291
T290 Noun_Phrase 7674 7689 51 kDa isoforms
292-
T291 Noun_Phrase 7710 7721 mAb 203217
293-
T292 IDENTITY_chain 7710 7721 mAb 203217
292+
T291 Noun_Phrase 7710 7721 mAb 203217
293+
T292 IDENTITY_chain 7710 7721 mAb 203217
294294
T293 Noun_Phrase 7723 7727 Fig.
295295
T294 IDENTITY_chain 7723 7727 Fig.
296296
T295 Noun_Phrase 7723 7729 Fig. 1
@@ -314,7 +314,7 @@ T312 Noun_Phrase 8024 8031 Protein
314314
T313 IDENTITY_chain 8024 8031 Protein
315315
T314 Noun_Phrase 8062 8070 SDS-PAGE
316316
T315 IDENTITY_chain 8062 8070 SDS-PAGE
317-
T316 Noun_Phrase 8133 8144 mAb 203217
317+
T316 Noun_Phrase 8133 8144 mAb 203217
318318
T317 Noun_Phrase 8224 8237 Both isoforms
319319
T318 Noun_Phrase 8254 8269 red blood cells
320320
T319 Noun_Phrase 8274 8283 platelets
@@ -396,7 +396,7 @@ T394 Noun_Phrase 9777 9792 anxA7-/- mutant
396396
T395 APPOS_relation 9777 9792 anxA7-/- mutant
397397
T396 Noun_Phrase 9794 9796 ko
398398
T397 Noun_Phrase 9818 9842 Ca2+/ionophore treatment
399-
T398 Noun_Phrase 9920 9931 mAb 203217
399+
T398 Noun_Phrase 9920 9931 mAb 203217
400400
T399 Noun_Phrase 9936 9964 a sorcin polyclonal antibody
401401
T400 IDENTITY_chain 9936 9964 a sorcin polyclonal antibody
402402
T401 Noun_Phrase 9938 9944 sorcin
@@ -456,7 +456,7 @@ T454 Noun_Phrase 11273 11314 a self forming iodixanol density gradient
456456
T455 IDENTITY_chain 11273 11314 a self forming iodixanol density gradient
457457
T456 Noun_Phrase 11331 11343 the gradient
458458
T457 Noun_Phrase 11398 11407 Fractions
459-
T458 Noun_Phrase 11446 11457 mAb 203217
459+
T458 Noun_Phrase 11446 11457 mAb 203217
460460
T459 Noun_Phrase 11462 11492 the sorcin polyclonal antibody
461461
T460 Noun_Phrase 11466 11472 sorcin
462462
T461 Noun_Phrase 11495 11517 The lack of annexin A7
@@ -484,10 +484,10 @@ T482 Noun_Phrase 11906 11933 the anxA7-/-red blood cells
484484
T483 IDENTITY_chain 11906 11933 the anxA7-/-red blood cells
485485
T484 Noun_Phrase 11935 11939 They
486486
T485 Noun_Phrase 11979 11983 cell
487-
T486 Noun_Phrase 11996 12002 6.0 ?m
488-
T487 IDENTITY_chain 11996 12002 6.0 ?m
489-
T488 Noun_Phrase 12030 12036 5.7 ?m
490-
T489 IDENTITY_chain 12030 12036 5.7 ?m
487+
T486 Noun_Phrase 11996 12002 6.0 μm
488+
T487 IDENTITY_chain 11996 12002 6.0 μm
489+
T488 Noun_Phrase 12030 12036 5.7 μm
490+
T489 IDENTITY_chain 12030 12036 5.7 μm
491491
T490 Noun_Phrase 12130 12134 Fig.
492492
T491 Noun_Phrase 12130 12136 Fig. 4
493493
T492 Noun_Phrase 12164 12191 the mean corpuscular volume
@@ -505,8 +505,8 @@ T503 Noun_Phrase 12280 12316;12335 12339 red blood cells from anxA7-/- mutant mi
505505
T504 Noun_Phrase 12301 12316;12335 12339 anxA7-/- mutant mice
506506
T505 Noun_Phrase 12325 12339 wild type mice
507507
T506 IDENTITY_chain 12325 12339 wild type mice
508-
T507 Noun_Phrase 12377 12383 6.0 ?m
509-
T508 Noun_Phrase 12388 12394 5.7 ?m
508+
T507 Noun_Phrase 12377 12383 6.0 μm
509+
T508 Noun_Phrase 12388 12394 5.7 μm
510510
T509 Noun_Phrase 12511 12527 a red blood cell
511511
T510 IDENTITY_chain 12511 12527 a red blood cell
512512
T511 Noun_Phrase 12550 12553 its
@@ -1027,8 +1027,8 @@ T1025 Noun_Phrase 30003 30018 Red blood cells
10271027
T1026 Noun_Phrase 30038 30071 hemoglobin containing exovesicles
10281028
T1027 Noun_Phrase 30109 30113 Ca2+
10291029
T1028 Noun_Phrase 30172 30177 blood
1030-
T1029 Noun_Phrase 30232 30235 4C
1031-
T1030 IDENTITY_chain 30232 30235 4C
1030+
T1029 Noun_Phrase 30232 30235 4°C
1031+
T1030 IDENTITY_chain 30232 30235 4°C
10321032
T1031 Noun_Phrase 30237 30253 The erythrocytes
10331033
T1032 Noun_Phrase 30282 30293 20 mM Hepes
10341034
T1033 Noun_Phrase 30295 30301 pH 7.5
@@ -1043,23 +1043,23 @@ T1041 Noun_Phrase 30406 30418 vesiculation
10431043
T1042 Noun_Phrase 30427 30438 20 mM Hepes
10441044
T1043 Noun_Phrase 30440 30446 pH 7.5
10451045
T1044 Noun_Phrase 30448 30459 150 mM NaCl
1046-
T1045 Noun_Phrase 30544 30548 37C
1047-
T1046 IDENTITY_chain 30544 30548 37C
1048-
T1047 Noun_Phrase 30676 30679 4C
1049-
T1048 Noun_Phrase 30681 30763 The supernatant was collected and centrifuged for 20 minutes at 15,000 g and 4C
1050-
T1049 Noun_Phrase 30745 30755 15,000 g
1051-
T1050 IDENTITY_chain 30745 30755 15,000 g
1052-
T1051 Noun_Phrase 30760 30763 4C
1046+
T1045 Noun_Phrase 30544 30548 37°C
1047+
T1046 IDENTITY_chain 30544 30548 37°C
1048+
T1047 Noun_Phrase 30676 30679 4°C
1049+
T1048 Noun_Phrase 30681 30763 The supernatant was collected and centrifuged for 20 minutes at 15,000 × g and 4°C
1050+
T1049 Noun_Phrase 30745 30755 15,000 × g
1051+
T1050 IDENTITY_chain 30745 30755 15,000 × g
1052+
T1051 Noun_Phrase 30760 30763 4°C
10531053
T1052 Noun_Phrase 30805 30819 washing buffer
10541054
T1053 Noun_Phrase 30892 30906 red blood cell
10551055
T1054 Noun_Phrase 30892 30920 red blood cell microvesicles
10561056
T1055 IDENTITY_chain 30892 30920 red blood cell microvesicles
1057-
T1056 Noun_Phrase 30941 30960 the 15,000 g step
1058-
T1057 IDENTITY_chain 30941 30960 the 15,000 g step
1059-
T1058 Noun_Phrase 30945 30955 15,000 g
1060-
T1059 Noun_Phrase 31019 31022 4C
1057+
T1056 Noun_Phrase 30941 30960 the 15,000 × g step
1058+
T1057 IDENTITY_chain 30941 30960 the 15,000 × g step
1059+
T1058 Noun_Phrase 30945 30955 15,000 × g
1060+
T1059 Noun_Phrase 31019 31022 4°C
10611061
T1060 Noun_Phrase 31073 31087 washing buffer
1062-
T1061 Noun_Phrase 31107 31117 15,000 g
1062+
T1061 Noun_Phrase 31107 31117 15,000 × g
10631063
T1062 Noun_Phrase 31160 31172 nanovesicles
10641064
T1063 Noun_Phrase 31194 31206 The vesicles
10651065
T1064 Noun_Phrase 31224 31246 acetylcholine esterase
@@ -1069,7 +1069,7 @@ T1067 Noun_Phrase 31336 31350 red blood cell
10691069
T1068 Noun_Phrase 31336 31359 red blood cell vesicles
10701070
T1069 Noun_Phrase 31402 31413 20 mM Hepes
10711071
T1070 Noun_Phrase 31423 31434 150 mM NaCl
1072-
T1071 Noun_Phrase 31497 31501 37C
1072+
T1071 Noun_Phrase 31497 31501 37°C
10731073
T1072 Noun_Phrase 31578 31582 DTNB
10741074
T1073 Noun_Phrase 31584 31619 5,5'-dithiobis-(2-nitrobenzoic acid
10751075
T1074 APPOS_relation 31584 31619 5,5'-dithiobis-(2-nitrobenzoic acid
@@ -1100,7 +1100,7 @@ T1098 Noun_Phrase 32864 32873 APACT 1.4
11001100
T1099 APPOS_relation 32864 32873 APACT 1.4
11011101
T1100 Noun_Phrase 32900 32907 the PRP
11021102
T1101 Noun_Phrase 33004 33012 platelet
1103-
T1102 Noun_Phrase 33162 33166 37C
1103+
T1102 Noun_Phrase 33162 33166 37°C
11041104
T1103 Noun_Phrase 33179 33188 the assay
11051105
T1104 Noun_Phrase 33249 33291 a prewarmed 16.5 mg/ml ristocetin solution
11061106
T1105 APPOS_relation 33249 33291 a prewarmed 16.5 mg/ml ristocetin solution
@@ -1147,7 +1147,7 @@ T1145 Noun_Phrase 34797 34819 Recombinant annexin A7
11471147
T1146 IDENTITY_chain 34797 34819 Recombinant annexin A7
11481148
T1147 Noun_Phrase 34871 34893 recombinant annexin A7
11491149
T1148 Noun_Phrase 34922 34930 SDS-PAGE
1150-
T1149 Noun_Phrase 35076 35087 mab 203217
1150+
T1149 Noun_Phrase 35076 35087 mab 203217
11511151
T1150 Noun_Phrase 35623 35630 Authors
11521152
T1151 Noun_Phrase 35703 35722 the red blood cells
11531153
T1152 Noun_Phrase 35703 35736 the red blood cells and platelets

coreference/brat/14609438.ann

Lines changed: 4 additions & 4 deletions
Original file line numberDiff line numberDiff line change
@@ -365,8 +365,8 @@ T363 Noun_Phrase 12427 12438 this pocket
365365
T364 Noun_Phrase 12510 12512 it
366366
T365 Noun_Phrase 12544 12554 the pocket
367367
T366 Noun_Phrase 12576 12584 Figure 6
368-
T367 Noun_Phrase 12597 12638 the main chain including residues 164165
369-
T368 IDENTITY_chain 12597 12638 the main chain including residues 164165
368+
T367 Noun_Phrase 12597 12638 the main chain including residues 164165
369+
T368 IDENTITY_chain 12597 12638 the main chain including residues 164165
370370
T369 Noun_Phrase 12732 12759 This part of the main chain
371371
T370 Noun_Phrase 12896 12916 the catalytic Ser280
372372
T371 IDENTITY_chain 12896 12916 the catalytic Ser280
@@ -387,8 +387,8 @@ T385 Noun_Phrase 13196 13199 its
387387
T386 Noun_Phrase 13266 13273 solvent
388388
T387 IDENTITY_chain 13266 13273 solvent
389389
T388 Noun_Phrase 13291 13301 the pocket
390-
T389 Noun_Phrase 13316 13382 the main chain of residues 130132 that flank the conserved Gly131
391-
T390 IDENTITY_chain 13316 13382 the main chain of residues 130132 that flank the conserved Gly131
390+
T389 Noun_Phrase 13316 13382 the main chain of residues 130132 that flank the conserved Gly131
391+
T390 IDENTITY_chain 13316 13382 the main chain of residues 130132 that flank the conserved Gly131
392392
T391 Noun_Phrase 13391 13413 this part of the chain
393393
T392 Noun_Phrase 13466 13468 P1
394394
T393 IDENTITY_chain 13466 13468 P1

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