sounder-sips-application/Dockerfile.l1b at b24e9a7198c608d88a43fb06fb4ecf185b2f70a6 · nlahaye/sounder-sips-application · GitHub

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FROM unity-sds/sounder_sips_pge_common:r0.1.0 AS builder

ARG BUILD_PATH /build
ARG NUM_COMPILE_JOBS=4

RUN cd $BUILD_PATH/spss/src/sips_pge/l1b_atms/make && make -j $NUM_COMPILE_JOBS

FROM centos:7

ENV PGSHOME=/opt/packages/sdptk5.2.20v1.01/TOOLKIT/
ENV PGS_PC_INFO_FILE=/pge/static/SNDR.PGSToolkit_ProcessControlFile.pcf
ENV PGS_LEAPSEC_FILE=${PGEHOME}/database/common/TD/leapsec.dat

# Ensure using UTF-8
RUN localedef -c -f UTF-8 -i en_US en_US.UTF-8

# Install packages required for this PGE
# Packages in the second yum call come from EPEL
RUN yum install -y libquadmath epel-release && \
    yum install -y python2-netcdf4 && \
    yum install -y python3-pip python3-netcdf4 && \
    pip3 install -U pip && \
    pip3 install notebook papermill && \
    yum clean all && \
    rm -rf /var/cache/yum

# Create directory structure for PGE files and necessary files
RUN mkdir -p /pge/bin && \
    mkdir -p /pge/static && \
    mkdir -p /pge/interface && \
    mkdir -p /opt/packages

# Copy L1B PGE binary
COPY --from=builder /build/spss/src/sips_pge/l1b_atms/main/bin/L1BMw_main /pge/bin

# Copy MetExtractor binary from build
COPY --from=builder /build/spss/src/scf_metextractors/main/bin/MetExtractor /pge/bin

# Copy PGE interface notebook
COPY interface/run_l1b_pge.ipynb /pge/interface

# Copy over SDP Toolkit for its database files
COPY --from=builder /opt/packages/sdptk5.2.20v1.01 /opt/packages/sdptk5.2.20v1.01

# Update leap seconds file. This file needs to be periodically updated
COPY ephemeris/leapsec.dat /opt/packages/sdptk5.2.20v1.01/TOOLKIT/database/common/TD/leapsec.dat
COPY ephemeris/utcpole.dat /opt/packages/sdptk5.2.20v1.01/TOOLKIT/database/common/CSC/utcpole.dat

# Copy files from acceptance test directories, these are referenced by the input XML file
COPY src/pcf/SNDR.PGSToolkit_ProcessControlFile.pcf /pge/static
COPY src/src/sips_pge/l1b_atms_snpp/acctest/in/SNDR.SNPP.L1bMw.sfif.acctest.xml /pge/static
COPY src/src/sips_pge/l1b_atms_snpp/acctest/in/SNDR.SchemaParameterfile.060401120000.xsd /pge/static

# Modify SFIF file to point to Docker paths
RUN sed -i 's|../../../static|/pge/static|' /pge/static/SNDR.SNPP.L1bMw.sfif.acctest.xml

# Modify to point DEMs to a path controlled by Docker
RUN sed -i -e 's|/peate/support/static/dem|/tmp/static/dem|' -e 's|/ref/devstable/STORE/mcf|/tmp/static/mcf|' /pge/static/SNDR.PGSToolkit_ProcessControlFile.pcf

# Static files referenced in SFIF file
COPY src/src/sips_pge/l1b_atms_snpp/static/SNDR.SNPP.L1bMw.template.201217000000.nc /pge/static
COPY src/src/sips_pge/l1b_atms_snpp/static/SNDR.SNPP.L1bMw.apf.171115000000.xml /pge/static
COPY src/src/sips_pge/l1b_atms_snpp/static/SNDR.SIPS.SNPP.ATMS.L1B.SPDCMetConstants_170801000000.pev /pge/static
COPY src/src/sips_pge/l1b_atms_snpp/static/SNDR.SIPS.SNPP.ATMS.L1B.SPDCMetMappings_171115000000.xml /pge/static
COPY src/src/sips_pge/l1b_atms_snpp/static/SNDR.SIPS.ATMS.L1B.SPDCMetStructure_171115000000.xml /pge/static

# Template PGE configuration file modified by Jupyter notebook
COPY src/src/sips_pge/l1b_atms_snpp/acctest/spdc_nominal/in/SNDR.SNPP.L1bMw.nominal.config.xml /pge/static/pge_config_template.xml

# Necessary for click framework used by papermill:
# https://click.palletsprojects.com/en/8.0.x/unicode-support/
ENV LANG=C.UTF-8
ENV LC_ALL=en_US.UTF-8

ENTRYPOINT ["papermill", "/pge/interface/run_l1b_pge.ipynb"]