From 331c3803a6686b293c22f6c785c117bab20f80f1 Mon Sep 17 00:00:00 2001 From: Luke Zappia Date: Thu, 23 Jan 2025 08:35:21 +0100 Subject: [PATCH 1/4] Increase scprint memory tags --- src/methods/scprint/config.vsh.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/methods/scprint/config.vsh.yaml b/src/methods/scprint/config.vsh.yaml index 1f2cad83..0efe1d84 100644 --- a/src/methods/scprint/config.vsh.yaml +++ b/src/methods/scprint/config.vsh.yaml @@ -92,4 +92,4 @@ runners: - type: executable - type: nextflow directives: - label: [hightime, midmem, midcpu, gpu, midsharedmem] + label: [hightime, highmem, midcpu, gpu, highsharedmem] From 2fbb92e2085a5ee9ef54cd053687ac55b3b8e190 Mon Sep 17 00:00:00 2001 From: Luke Zappia Date: Thu, 23 Jan 2025 08:36:20 +0100 Subject: [PATCH 2/4] Add veryhighmem tag to uce --- src/methods/uce/config.vsh.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/methods/uce/config.vsh.yaml b/src/methods/uce/config.vsh.yaml index c67ea904..04757c92 100644 --- a/src/methods/uce/config.vsh.yaml +++ b/src/methods/uce/config.vsh.yaml @@ -43,4 +43,4 @@ runners: - type: executable - type: nextflow directives: - label: [hightime, highmem, midcpu, gpu] + label: [hightime, veryhighmem, midcpu, gpu] From c5de03784fc8f0e4c754e1c87c9f25d633453455 Mon Sep 17 00:00:00 2001 From: Luke Zappia Date: Thu, 23 Jan 2025 08:37:34 +0100 Subject: [PATCH 3/4] Add highmem label to geneformer --- src/methods/geneformer/config.vsh.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/methods/geneformer/config.vsh.yaml b/src/methods/geneformer/config.vsh.yaml index a98ab008..ede20d07 100644 --- a/src/methods/geneformer/config.vsh.yaml +++ b/src/methods/geneformer/config.vsh.yaml @@ -60,4 +60,4 @@ runners: - type: executable - type: nextflow directives: - label: [hightime, midmem, midcpu, gpu] + label: [hightime, highmem, midcpu, gpu] From 109cdd55583f265e6a3fbf4994891650a2c3348c Mon Sep 17 00:00:00 2001 From: Luke Zappia Date: Thu, 23 Jan 2025 12:11:23 +0100 Subject: [PATCH 4/4] Add biggpu label to uce --- src/methods/uce/config.vsh.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/methods/uce/config.vsh.yaml b/src/methods/uce/config.vsh.yaml index 04757c92..b37f4040 100644 --- a/src/methods/uce/config.vsh.yaml +++ b/src/methods/uce/config.vsh.yaml @@ -43,4 +43,4 @@ runners: - type: executable - type: nextflow directives: - label: [hightime, veryhighmem, midcpu, gpu] + label: [hightime, veryhighmem, midcpu, biggpu]