Verify images in manifest list are not dangling and pruned

Vendor in latest containers/common

Currently if you create an un tagged image and add it to a manifest
list, podman image prune will remove the image, and leave you with
a broken manifest list. This PR removes the image from dangling in
this situation and prevents the pruning.

We have seen this trigger issues with RamaLama which is creating
manifest lists in this manner, and then users pruning the images.

Verifing: containers/common#2360

Signed-off-by: Daniel J Walsh <dwalsh@redhat.com>

Author: rhatdan

Makefile

@@ -363,7 +363,7 @@ $(IN_CONTAINER): %-in-container:
 	$(PODMANCMD) run --rm --env HOME=/root \
 		-v $(CURDIR):/src -w /src \
 		--security-opt label=disable \
-		docker.io/library/golang:1.22 \
+		docker.io/library/golang:1.23 \
 		make $(*)
 
 

go.mod

@@ -53,7 +53,7 @@ require (
 	github.com/moby/sys/user v0.3.0
 	github.com/moby/term v0.5.2
 	github.com/nxadm/tail v1.4.11
-	github.com/onsi/ginkgo/v2 v2.22.2
+	github.com/onsi/ginkgo/v2 v2.23.0
 	github.com/onsi/gomega v1.36.2
 	github.com/opencontainers/go-digest v1.0.0
 	github.com/opencontainers/image-spec v1.1.1
@@ -222,14 +222,16 @@ require (
 	go.opentelemetry.io/otel/trace v1.32.0 // indirect
 	golang.org/x/arch v0.8.0 // indirect
 	golang.org/x/exp v0.0.0-20250128182459-e0ece0dbea4c // indirect
-	golang.org/x/mod v0.22.0 // indirect
+	golang.org/x/mod v0.23.0 // indirect
 	golang.org/x/oauth2 v0.26.0 // indirect
 	golang.org/x/time v0.9.0 // indirect
-	golang.org/x/tools v0.29.0 // indirect
+	golang.org/x/tools v0.30.0 // indirect
 	google.golang.org/genproto/googleapis/api v0.0.0-20241209162323-e6fa225c2576 // indirect
 	google.golang.org/genproto/googleapis/rpc v0.0.0-20250115164207-1a7da9e5054f // indirect
 	google.golang.org/grpc v1.70.0 // indirect
 	gopkg.in/natefinch/lumberjack.v2 v2.2.1 // indirect
 	gopkg.in/tomb.v1 v1.0.0-20141024135613-dd632973f1e7 // indirect
 	tags.cncf.io/container-device-interface/specs-go v0.8.0 // indirect
 )
+
+replace github.com/containers/common => github.com/rhatdan/common v0.47.1-0.20250312182044-4cdd4855847f

go.sum

@@ -78,8 +78,6 @@ github.com/containernetworking/plugins v1.5.1 h1:T5ji+LPYjjgW0QM+KyrigZbLsZ8jaX+
 github.com/containernetworking/plugins v1.5.1/go.mod h1:MIQfgMayGuHYs0XdNudf31cLLAC+i242hNm6KuDGqCM=
 github.com/containers/buildah v1.39.2 h1:YaFMNnuTr7wKYKQDHkm7yyP9HhWVrNB4DA+DjYUS9k4=
 github.com/containers/buildah v1.39.2/go.mod h1:Vb4sDbEq06qQqk29mcGw/1qit8dyukpfL4hwNQ5t+z8=
-github.com/containers/common v0.62.2-0.20250306142925-6e82793fd29d h1:FTsiNAhuriMBXf6x5e9pFoc4W2mJxsnI0HUOBpPGB94=
-github.com/containers/common v0.62.2-0.20250306142925-6e82793fd29d/go.mod h1:Dta+lCx83XAeGHtWwTPz+UwpWMiC0nMZQu4LWm1mTEg=
 github.com/containers/conmon v2.0.20+incompatible h1:YbCVSFSCqFjjVwHTPINGdMX1F6JXHGTUje2ZYobNrkg=
 github.com/containers/conmon v2.0.20+incompatible/go.mod h1:hgwZ2mtuDrppv78a/cOBNiCm6O0UMWGx1mu7P00nu5I=
 github.com/containers/gvisor-tap-vsock v0.8.4 h1:z7MqcldnXYGaU6uTaKVl7RFxTmbhNsd2UL0CyM3fdBs=
@@ -388,8 +386,8 @@ github.com/nxadm/tail v1.4.11 h1:8feyoE3OzPrcshW5/MJ4sGESc5cqmGkGCWlco4l0bqY=
 github.com/nxadm/tail v1.4.11/go.mod h1:OTaG3NK980DZzxbRq6lEuzgU+mug70nY11sMd4JXXHc=
 github.com/oklog/ulid v1.3.1 h1:EGfNDEx6MqHz8B3uNV6QAib1UR2Lm97sHi3ocA6ESJ4=
 github.com/oklog/ulid v1.3.1/go.mod h1:CirwcVhetQ6Lv90oh/F+FBtV6XMibvdAFo93nm5qn4U=
-github.com/onsi/ginkgo/v2 v2.22.2 h1:/3X8Panh8/WwhU/3Ssa6rCKqPLuAkVY2I0RoyDLySlU=
-github.com/onsi/ginkgo/v2 v2.22.2/go.mod h1:oeMosUL+8LtarXBHu/c0bx2D/K9zyQ6uX3cTyztHwsk=
+github.com/onsi/ginkgo/v2 v2.23.0 h1:FA1xjp8ieYDzlgS5ABTpdUDB7wtngggONc8a7ku2NqQ=
+github.com/onsi/ginkgo/v2 v2.23.0/go.mod h1:zXTP6xIp3U8aVuXN8ENK9IXRaTjFnpVB9mGmaSRvxnM=
 github.com/onsi/gomega v1.36.2 h1:koNYke6TVk6ZmnyHrCXba/T/MoLBXFjeC1PtvYgw0A8=
 github.com/onsi/gomega v1.36.2/go.mod h1:DdwyADRjrc825LhMEkD76cHR5+pUnjhUN8GlHlRPHzY=
 github.com/opencontainers/go-digest v1.0.0 h1:apOUWs51W5PlhuyGyz9FCeeBIOUDA/6nW8Oi/yOhh5U=
@@ -436,6 +434,8 @@ github.com/prometheus/common v0.57.0 h1:Ro/rKjwdq9mZn1K5QPctzh+MA4Lp0BuYk5ZZEVho
 github.com/prometheus/common v0.57.0/go.mod h1:7uRPFSUTbfZWsJ7MHY56sqt7hLQu3bxXHDnNhl8E9qI=
 github.com/prometheus/procfs v0.15.1 h1:YagwOFzUgYfKKHX6Dr+sHT7km/hxC76UB0learggepc=
 github.com/prometheus/procfs v0.15.1/go.mod h1:fB45yRUv8NstnjriLhBQLuOUt+WW4BsoGhij/e3PBqk=
+github.com/rhatdan/common v0.47.1-0.20250312182044-4cdd4855847f h1:ciuZQU7aLTuohHUArUxjaRiX5zw5qkPVySs9DhoEezc=
+github.com/rhatdan/common v0.47.1-0.20250312182044-4cdd4855847f/go.mod h1:i0fnjNTrMgccd3s+T3QDfgW4KXVEcZbcT3iE2BIO/WI=
 github.com/rivo/uniseg v0.2.0/go.mod h1:J6wj4VEh+S6ZtnVlnTBMWIodfgj8LQOQFoIToxlJtxc=
 github.com/rivo/uniseg v0.4.7 h1:WUdvkW8uEhrYfLC4ZzdpI2ztxP1I582+49Oc5Mq64VQ=
 github.com/rivo/uniseg v0.4.7/go.mod h1:FN3SvrM+Zdj16jyLfmOkMNblXMcoc8DfTHruCPUcx88=
@@ -600,8 +600,8 @@ golang.org/x/mod v0.8.0/go.mod h1:iBbtSCu2XBx23ZKBPSOrRkjjQPZFPuis4dIYUhu/chs=
 golang.org/x/mod v0.12.0/go.mod h1:iBbtSCu2XBx23ZKBPSOrRkjjQPZFPuis4dIYUhu/chs=
 golang.org/x/mod v0.15.0/go.mod h1:hTbmBsO62+eylJbnUtE2MGJUyE7QWk4xUqPFrRgJ+7c=
 golang.org/x/mod v0.17.0/go.mod h1:hTbmBsO62+eylJbnUtE2MGJUyE7QWk4xUqPFrRgJ+7c=
-golang.org/x/mod v0.22.0 h1:D4nJWe9zXqHOmWqj4VMOJhvzj7bEZg4wEYa759z1pH4=
-golang.org/x/mod v0.22.0/go.mod h1:6SkKJ3Xj0I0BrPOZoBy3bdMptDDU9oJrpohJ3eWZ1fY=
+golang.org/x/mod v0.23.0 h1:Zb7khfcRGKk+kqfxFaP5tZqCnDZMjC5VtUBs87Hr6QM=
+golang.org/x/mod v0.23.0/go.mod h1:6SkKJ3Xj0I0BrPOZoBy3bdMptDDU9oJrpohJ3eWZ1fY=
 golang.org/x/net v0.0.0-20180724234803-3673e40ba225/go.mod h1:mL1N/T3taQHkDXs73rZJwtUhF3w3ftmwwsq0BUmARs4=
 golang.org/x/net v0.0.0-20180826012351-8a410e7b638d/go.mod h1:mL1N/T3taQHkDXs73rZJwtUhF3w3ftmwwsq0BUmARs4=
 golang.org/x/net v0.0.0-20190213061140-3a22650c66bd/go.mod h1:mL1N/T3taQHkDXs73rZJwtUhF3w3ftmwwsq0BUmARs4=
@@ -709,8 +709,8 @@ golang.org/x/tools v0.1.12/go.mod h1:hNGJHUnrk76NpqgfD5Aqm5Crs+Hm0VOH/i9J2+nxYbc
 golang.org/x/tools v0.6.0/go.mod h1:Xwgl3UAJ/d3gWutnCtw505GrjyAbvKui8lOU390QaIU=
 golang.org/x/tools v0.13.0/go.mod h1:HvlwmtVNQAhOuCjW7xxvovg8wbNq7LwfXh/k7wXUl58=
 golang.org/x/tools v0.21.1-0.20240508182429-e35e4ccd0d2d/go.mod h1:aiJjzUbINMkxbQROHiO6hDPo2LHcIPhhQsa9DLh0yGk=
-golang.org/x/tools v0.29.0 h1:Xx0h3TtM9rzQpQuR4dKLrdglAmCEN5Oi+P74JdhdzXE=
-golang.org/x/tools v0.29.0/go.mod h1:KMQVMRsVxU6nHCFXrBPhDB8XncLNLM0lIy/F14RP588=
+golang.org/x/tools v0.30.0 h1:BgcpHewrV5AUp2G9MebG4XPFI1E2W41zU1SaqVA9vJY=
+golang.org/x/tools v0.30.0/go.mod h1:c347cR/OJfw5TI+GfX7RUPNMdDRRbjvYTS0jPyvsVtY=
 golang.org/x/xerrors v0.0.0-20190717185122-a985d3407aa7/go.mod h1:I/5z698sn9Ka8TeJc9MKroUUfqBBauWjQqLJ2OPfmY0=
 golang.org/x/xerrors v0.0.0-20191011141410-1b5146add898/go.mod h1:I/5z698sn9Ka8TeJc9MKroUUfqBBauWjQqLJ2OPfmY0=
 golang.org/x/xerrors v0.0.0-20191204190536-9bdfabe68543/go.mod h1:I/5z698sn9Ka8TeJc9MKroUUfqBBauWjQqLJ2OPfmY0=

pkg/domain/infra/abi/images.go

@@ -597,7 +597,7 @@ func (ir *ImageEngine) Tree(ctx context.Context, nameOrID string, opts entities.
 	if err != nil {
 		return nil, err
 	}
-	tree, err := image.Tree(opts.WhatRequires)
+	tree, err := image.Tree(ctx, opts.WhatRequires)
 	if err != nil {
 		return nil, err
 	}

test/system/012-manifest.bats

@@ -324,4 +324,30 @@ function manifestListAddArtifactOnce() {
         manifestListAddArtifactOnce
     done
 }
+
+@test "manifest list images should not be marked as dangling" {
+      # build image and attach it to a manifest list
+      mlist=m-$(safename)
+      run_podman build -q -f -  <<< "from scratch"
+      iid=${output}
+      run_podman manifest create ${mlist} ${iid}
+
+      # verify image is not dangling, and is not remove via prune
+      run_podman images --filter dangling=true
+      assert "$output" != "sha256:${iid}" "Verify the filter dangling does not list the image"
+      run_podman image prune --force
+      assert "$output" != "${iid}" "Verify the prune does not remove the non dangling image"
+      run_podman image exists ${iid}
+
+      # Remove manifes
+      run_podman manifest rm ${mlist}
+
+      # verify the image is now dangling, and is removed via prune
+      run_podman images -q --filter dangling=true --no-trunc
+      assert "$output" == "sha256:${iid}" "Verify the filter dangling does list the image"
+      run_podman image prune --force
+      assert "$output" == "${iid}" "Verify that prune does not remove the dangling image"
+      run_podman 1 image exists ${iid}
+}
+
 # vim: filetype=sh