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inOpenTreeOfLife/germinator (press backspace or delete to remove)

This is necessary for now, since we need to deploy old web-apps etc. on new Ubuntu servers. NB This is a work in progress, so probably best not to merge at this point. But I m interested in reviews and ...
  • jimallman
  • 2
  • Opened 
    on Jun 1, 2022
  • #165

See https://github.com/OpenTreeOfLife/reference-taxonomy/pull/388 for explanation and context.
  • jimallman
  • 1
  • Opened 
    on Oct 27, 2021
  • #164

Should fix #161, but haven t tested yet.
  • jimallman
  • Opened 
    on May 29, 2020
  • #162

This is a fix. It is also necessary for the deploying to devapi to serve as a canary.
  • bredelings
  • 1
  • Opened 
    on May 26, 2020
  • #160

Ensure that we start a NEW pserve. Otherwise deploying to devapi doesn t serve as a canary.
  • bredelings
  • Opened 
    on May 26, 2020
  • #159

This branch also incorporates selected improvements from easter-fix, all now conforming to our usual deployment methods (no manual tweaking required).
  • jimallman
  • 11
  • Opened 
    on May 13, 2020
  • #155

  • jimallman
  • 4
  • Opened 
    on May 8, 2020
  • #154

First pass at config changes to restrict http verbs. Also changes tnrs from neo4j to otcetera. Needs review to confirm 1) correct ports for otc and 2) which methods require opening up POST. Requires installation ...
  • kcranston
  • 11
  • Opened 
    on Apr 15, 2020
  • #153

This avoids an error when there are multiple Python versions installed, since expanding multiple header files will cause an bash error: ./as-admin.sh: line 107: [: too many arguments Adapted from the ...
  • jimallman
  • Opened 
    on Mar 19, 2020
  • #152

I realized a couple of problems that caused these to hang the push script. (Despite the nohub command, stdout and stderr were both holding onto the calling shell, so these are now diverted to log files ...
  • jimallman
  • 1
  • Opened 
    on Feb 21, 2020
  • #151