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Fix generated workflow worktree gates#147

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khaliqgant merged 9 commits into
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fix/generated-workflow-worktree-gates
Jun 1, 2026
Merged

Fix generated workflow worktree gates#147
khaliqgant merged 9 commits into
mainfrom
fix/generated-workflow-worktree-gates

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Summary

  • Harden generated workflow validation for specs that declare a worktree and target branch.
  • Require generated workflows to create/use the declared worktree path and reject invalid test -f gates for directories, worktree roots, and glob paths.
  • Add parser-backed coverage for worktree declarations, setup ordering, decoy heredoc/comment content, branch mentions, and file-gate validation.
  • Add .agentworkforce trajectory artifacts for the local work history.

Tests

  • Not run in this turn; PR contains the existing branch commits plus the trajectory archive commit.

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Reviewing files that changed from the base of the PR and between d9ce9b6 and f3d9bbb.

📒 Files selected for processing (300)
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Code Review

This pull request adds a comprehensive set of agent trajectory logs, compactions, and summaries in both JSON and Markdown formats under the .agentworkforce/ directory. These files document the execution history, key decisions, conventions established, lessons learned, and statistics of various agent-run workflows (such as wave8, wave10, and wave12) for the Ricky project. There are no review comments on these changes, so I have no feedback to provide.

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4 issues found across 371 files

Prompt for AI agents (unresolved issues)

Check if these issues are valid — if so, understand the root cause of each and fix them. If appropriate, use sub-agents to investigate and fix each issue separately.


<file name=".agentworkforce/trajectories/completed/2026-04/traj_0crqhj2jmg33.md">

<violation number="1" location=".agentworkforce/trajectories/completed/2026-04/traj_0crqhj2jmg33.md:38">
P3: Redundant and structurally ambiguous bullet point in the Chapters section. The text is duplicated as both label and value (`A: A`), and the item floats at the chapters level instead of being nested under a specific chapter. This adds no information and could confuse automated trajectory parsers or readers.</violation>
</file>

Note: This PR contains a large number of files. cubic only reviews up to 100 files per PR, so some files may not have been reviewed. cubic prioritizes the most important files to review.
On a pro plan you can use ultrareview for larger PRs.

Re-trigger cubic

Comment thread .agentworkforce/trajectories/completed/2026-04/traj_g7kbc9q3tbad.json Outdated
### 3. Execution: write-proof-verdict
*Agent: proof-codex*

- Kept existing live proof verdict document content: Kept existing live proof verdict document content

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P3: Redundant and structurally ambiguous bullet point in the Chapters section. The text is duplicated as both label and value (A: A), and the item floats at the chapters level instead of being nested under a specific chapter. This adds no information and could confuse automated trajectory parsers or readers.

Prompt for AI agents
Check if this issue is valid — if so, understand the root cause and fix it. At .agentworkforce/trajectories/completed/2026-04/traj_0crqhj2jmg33.md, line 38:

<comment>Redundant and structurally ambiguous bullet point in the Chapters section. The text is duplicated as both label and value (`A: A`), and the item floats at the chapters level instead of being nested under a specific chapter. This adds no information and could confuse automated trajectory parsers or readers.</comment>

<file context>
@@ -0,0 +1,38 @@
+### 3. Execution: write-proof-verdict
+*Agent: proof-codex*
+
+- Kept existing live proof verdict document content: Kept existing live proof verdict document content
</file context>

Comment thread .agentworkforce/trajectories/completed/2026-04/traj_qzxso6k0ue00.json Outdated
@agent-relay-code

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Reviewed PR #147 and made the needed fixes.

Changed:

  • Tightened structured persona disk recovery so writerInvokedAtMs also prevents stale artifact reuse there.
  • Added regression coverage for stale structured placeholder recovery.
  • Fixed proof tests that were failing locally:
    • flat-layout proof now excludes harness/build/history outputs from active source scans.
    • external CLI proof uses sh -c so the linked ricky binary remains on PATH.

Verified locally:

  • npx tsc --noEmit
  • npm test → 59 passed, 1 skipped, 1262 tests passed

@agent-relay-code

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⚠️ pr-reviewer push failed (exit 1) — fixes were not applied to the PR. The notes below are advisory and were not pushed.

Reviewed PR #147 and made the needed fixes.

Changed:

  • Tightened structured persona disk recovery so writerInvokedAtMs also prevents stale artifact reuse there.
  • Added regression coverage for stale structured placeholder recovery.
  • Fixed proof tests that were failing locally:
    • flat-layout proof now excludes harness/build/history outputs from active source scans.
    • external CLI proof uses sh -c so the linked ricky binary remains on PATH.

Verified locally:

  • npx tsc --noEmit
  • npm test → 59 passed, 1 skipped, 1262 tests passed

@agent-relay-code agent-relay-code Bot left a comment

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⚠️ pr-reviewer push failed (exit 1) — fixes were not applied to the PR. The notes below are advisory and were not pushed.

Reviewed PR #147 and made the needed fixes.

Changed:

  • Tightened structured persona disk recovery so writerInvokedAtMs also prevents stale artifact reuse there.
  • Added regression coverage for stale structured placeholder recovery.
  • Fixed proof tests that were failing locally:
    • flat-layout proof now excludes harness/build/history outputs from active source scans.
    • external CLI proof uses sh -c so the linked ricky binary remains on PATH.

Verified locally:

  • npx tsc --noEmit
  • npm test → 59 passed, 1 skipped, 1262 tests passed

@agent-relay-code

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Reviewed and fixed PR #147 locally.

Changes made:

  • Resolved bot review comments on trajectory artifacts:
    • Sanitized leaked absolute projectId paths.
    • Moved the reviewed May-dated trajectory into completed/2026-05.
    • Removed the redundant malformed markdown bullet.
  • Fixed a generated-workflow gate false positive so test -f on extensionless executables under bin/ or scripts/ is allowed.
  • Updated the flat-layout proof scanner to ignore archived .agentworkforce/trajectories/ files as historical records, not active repo references.

Validation run:

  • npm run typecheck passed.
  • Focused generation tests passed: 155 tests.
  • Full npm test passed: 61 files, 1388 tests, 1 skipped.

@agent-relay-code

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pr-reviewer applied fixes — committed and pushed bc9999c to this PR. The notes below describe what changed.

Reviewed and fixed PR #147 locally.

Changes made:

  • Resolved bot review comments on trajectory artifacts:
    • Sanitized leaked absolute projectId paths.
    • Moved the reviewed May-dated trajectory into completed/2026-05.
    • Removed the redundant malformed markdown bullet.
  • Fixed a generated-workflow gate false positive so test -f on extensionless executables under bin/ or scripts/ is allowed.
  • Updated the flat-layout proof scanner to ignore archived .agentworkforce/trajectories/ files as historical records, not active repo references.

Validation run:

  • npm run typecheck passed.
  • Focused generation tests passed: 155 tests.
  • Full npm test passed: 61 files, 1388 tests, 1 skipped.

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pr-reviewer applied fixes — committed and pushed bc9999c to this PR. The notes below describe what changed.

Reviewed and fixed PR #147 locally.

Changes made:

  • Resolved bot review comments on trajectory artifacts:
    • Sanitized leaked absolute projectId paths.
    • Moved the reviewed May-dated trajectory into completed/2026-05.
    • Removed the redundant malformed markdown bullet.
  • Fixed a generated-workflow gate false positive so test -f on extensionless executables under bin/ or scripts/ is allowed.
  • Updated the flat-layout proof scanner to ignore archived .agentworkforce/trajectories/ files as historical records, not active repo references.

Validation run:

  • npm run typecheck passed.
  • Focused generation tests passed: 155 tests.
  • Full npm test passed: 61 files, 1388 tests, 1 skipped.

@agent-relay-code

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Reviewed and fixed PR #147 locally.

Changes made:

  • Hardened structured persona disk recovery so writerInvokedAtMs also blocks stale artifact reuse.
  • Added regression coverage for stale structured placeholder recovery.
  • Fixed flat-layout proof scans to ignore inert .agentworkforce trajectory history.
  • Resolved bot-reviewed trajectory hygiene issues: removed leaked absolute local paths, moved the May 1 trajectory into 2026-05, and cleaned the ambiguous Markdown bullet.
  • Checked PR bot feedback on GitHub: Fix generated workflow worktree gates #147

Verification run locally:

  • npm run typecheck
  • npm test → 61 passed, 1 skipped; 1388 passed, 1 skipped
  • trajectory JSON parse check → JSON_PARSE_OK 197

@agent-relay-code

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⚠️ pr-reviewer did not push — the PR branch advanced during the review, so fixes were withheld to avoid overwriting newer commits. Re-trigger the review once the branch settles. The notes below are advisory and were not pushed.

Reviewed and fixed PR #147 locally.

Changes made:

  • Hardened structured persona disk recovery so writerInvokedAtMs also blocks stale artifact reuse.
  • Added regression coverage for stale structured placeholder recovery.
  • Fixed flat-layout proof scans to ignore inert .agentworkforce trajectory history.
  • Resolved bot-reviewed trajectory hygiene issues: removed leaked absolute local paths, moved the May 1 trajectory into 2026-05, and cleaned the ambiguous Markdown bullet.
  • Checked PR bot feedback on GitHub: Fix generated workflow worktree gates #147

Verification run locally:

  • npm run typecheck
  • npm test → 61 passed, 1 skipped; 1388 passed, 1 skipped
  • trajectory JSON parse check → JSON_PARSE_OK 197

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⚠️ pr-reviewer did not push — the PR branch advanced during the review, so fixes were withheld to avoid overwriting newer commits. Re-trigger the review once the branch settles. The notes below are advisory and were not pushed.

Reviewed and fixed PR #147 locally.

Changes made:

  • Hardened structured persona disk recovery so writerInvokedAtMs also blocks stale artifact reuse.
  • Added regression coverage for stale structured placeholder recovery.
  • Fixed flat-layout proof scans to ignore inert .agentworkforce trajectory history.
  • Resolved bot-reviewed trajectory hygiene issues: removed leaked absolute local paths, moved the May 1 trajectory into 2026-05, and cleaned the ambiguous Markdown bullet.
  • Checked PR bot feedback on GitHub: #147

Verification run locally:

  • npm run typecheck
  • npm test → 61 passed, 1 skipped; 1388 passed, 1 skipped
  • trajectory JSON parse check → JSON_PARSE_OK 197

@agent-relay-code

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Reviewed PR #147 and fixed one issue: test/flat-layout-proof/flat-layout-proof.ts was using regex to scan TypeScript imports. I replaced it with a TypeScript AST walk covering imports, re-exports, dynamic imports, and require() calls.

Local verification completed:
npm run typecheck
npm test - 61 passed, 1 skipped

No additional bot review artifacts were present in .workforce.

@agent-relay-code

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⚠️ pr-reviewer did not push — the PR branch advanced during the review, so fixes were withheld to avoid overwriting newer commits. Re-trigger the review once the branch settles. The notes below are advisory and were not pushed.

Reviewed PR #147 and fixed one issue: test/flat-layout-proof/flat-layout-proof.ts was using regex to scan TypeScript imports. I replaced it with a TypeScript AST walk covering imports, re-exports, dynamic imports, and require() calls.

Local verification completed:
npm run typecheck
npm test - 61 passed, 1 skipped

No additional bot review artifacts were present in .workforce.

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⚠️ pr-reviewer did not push — the PR branch advanced during the review, so fixes were withheld to avoid overwriting newer commits. Re-trigger the review once the branch settles. The notes below are advisory and were not pushed.

Reviewed PR #147 and fixed one issue: test/flat-layout-proof/flat-layout-proof.ts was using regex to scan TypeScript imports. I replaced it with a TypeScript AST walk covering imports, re-exports, dynamic imports, and require() calls.

Local verification completed:
npm run typecheck
npm test - 61 passed, 1 skipped

No additional bot review artifacts were present in .workforce.

@khaliqgant khaliqgant merged commit c289f75 into main Jun 1, 2026
3 checks passed
@khaliqgant khaliqgant deleted the fix/generated-workflow-worktree-gates branch June 1, 2026 12:22
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⚠️ pr-reviewer did not push — the PR branch advanced during the review, so fixes were withheld to avoid overwriting newer commits. Re-trigger the review once the branch settles. The notes below are advisory and were not pushed.

Reviewed and fixed PR #147 locally.

Changed test/flat-layout-proof/flat-layout-proof.ts to replace regex-based TypeScript import scanning with a ts.createSourceFile AST walk for imports, exports, dynamic imports, and require(...), matching the repo’s parser-aware source-text rule.

Local verification passed:
npm run typecheck
npx vitest run src/product/generation/workforce-persona-writer.test.ts
npx tsx test/flat-layout-proof/flat-layout-proof.ts
npm test with 1388 passed, 1 skipped

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⚠️ pr-reviewer did not push — the PR branch advanced during the review, so fixes were withheld to avoid overwriting newer commits. Re-trigger the review once the branch settles. The notes below are advisory and were not pushed.

Reviewed and fixed PR #147 locally.

Changed test/flat-layout-proof/flat-layout-proof.ts to replace regex-based TypeScript import scanning with a ts.createSourceFile AST walk for imports, exports, dynamic imports, and require(...), matching the repo’s parser-aware source-text rule.

Local verification passed:
npm run typecheck
npx vitest run src/product/generation/workforce-persona-writer.test.ts
npx tsx test/flat-layout-proof/flat-layout-proof.ts
npm test with 1388 passed, 1 skipped

@agent-relay-code

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Reviewed PR #147 and fixed the remaining issue from bot feedback.

Changed test/flat-layout-proof/flat-layout-proof.ts to extract TypeScript module specifiers with ts.createSourceFile instead of regex, covering imports, re-exports, dynamic imports, require(), and import = require() without matching comments or strings.

Added regression coverage in flat-layout-proof.test.ts.

Local validation passed:

  • npm run typecheck
  • npx vitest run src/product/generation/workforce-persona-writer.test.ts
  • npx vitest run test/flat-layout-proof/flat-layout-proof.test.ts
  • npx tsx test/flat-layout-proof/flat-layout-proof.ts
  • changed JSON parse sweep: JSON_PARSE_OK 198
  • npm test: 61 passed, 1 skipped; 1389 tests passed, 1 skipped

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⚠️ pr-reviewer did not push — the PR branch advanced during the review, so fixes were withheld to avoid overwriting newer commits. Re-trigger the review once the branch settles. The notes below are advisory and were not pushed.

Reviewed PR #147 and fixed the remaining issue from bot feedback.

Changed test/flat-layout-proof/flat-layout-proof.ts to extract TypeScript module specifiers with ts.createSourceFile instead of regex, covering imports, re-exports, dynamic imports, require(), and import = require() without matching comments or strings.

Added regression coverage in flat-layout-proof.test.ts.

Local validation passed:

  • npm run typecheck
  • npx vitest run src/product/generation/workforce-persona-writer.test.ts
  • npx vitest run test/flat-layout-proof/flat-layout-proof.test.ts
  • npx tsx test/flat-layout-proof/flat-layout-proof.ts
  • changed JSON parse sweep: JSON_PARSE_OK 198
  • npm test: 61 passed, 1 skipped; 1389 tests passed, 1 skipped

@agent-relay-code agent-relay-code Bot left a comment

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⚠️ pr-reviewer did not push — the PR branch advanced during the review, so fixes were withheld to avoid overwriting newer commits. Re-trigger the review once the branch settles. The notes below are advisory and were not pushed.

Reviewed PR #147 and fixed the remaining issue from bot feedback.

Changed test/flat-layout-proof/flat-layout-proof.ts to extract TypeScript module specifiers with ts.createSourceFile instead of regex, covering imports, re-exports, dynamic imports, require(), and import = require() without matching comments or strings.

Added regression coverage in flat-layout-proof.test.ts.

Local validation passed:

  • npm run typecheck
  • npx vitest run src/product/generation/workforce-persona-writer.test.ts
  • npx vitest run test/flat-layout-proof/flat-layout-proof.test.ts
  • npx tsx test/flat-layout-proof/flat-layout-proof.ts
  • changed JSON parse sweep: JSON_PARSE_OK 198
  • npm test: 61 passed, 1 skipped; 1389 tests passed, 1 skipped

@agent-relay-code

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Reviewed PR #147 and fixed the remaining issue from bot feedback.

Changed test/flat-layout-proof/flat-layout-proof.ts to use a TypeScript AST walk for module specifier extraction, including imports, re-exports, dynamic imports, require(), import type(...), and import = require(...), without matching comments or strings. Added regression coverage in test/flat-layout-proof/flat-layout-proof.test.ts.

Local validation passed:

  • npm run typecheck
  • npx vitest run src/product/generation/workforce-persona-writer.test.ts
  • npx vitest run test/flat-layout-proof/flat-layout-proof.test.ts
  • npx tsx test/flat-layout-proof/flat-layout-proof.ts
  • changed JSON parse sweep: JSON_PARSE_OK 198
  • npm test: 61 passed, 1 skipped; 1389 passed, 1 skipped

@agent-relay-code

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⚠️ pr-reviewer did not push — the PR branch advanced during the review, so fixes were withheld to avoid overwriting newer commits. Re-trigger the review once the branch settles. The notes below are advisory and were not pushed.

Reviewed PR #147 and fixed the remaining issue from bot feedback.

Changed test/flat-layout-proof/flat-layout-proof.ts to use a TypeScript AST walk for module specifier extraction, including imports, re-exports, dynamic imports, require(), import type(...), and import = require(...), without matching comments or strings. Added regression coverage in test/flat-layout-proof/flat-layout-proof.test.ts.

Local validation passed:

  • npm run typecheck
  • npx vitest run src/product/generation/workforce-persona-writer.test.ts
  • npx vitest run test/flat-layout-proof/flat-layout-proof.test.ts
  • npx tsx test/flat-layout-proof/flat-layout-proof.ts
  • changed JSON parse sweep: JSON_PARSE_OK 198
  • npm test: 61 passed, 1 skipped; 1389 passed, 1 skipped

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⚠️ pr-reviewer did not push — the PR branch advanced during the review, so fixes were withheld to avoid overwriting newer commits. Re-trigger the review once the branch settles. The notes below are advisory and were not pushed.

Reviewed PR #147 and fixed the remaining issue from bot feedback.

Changed test/flat-layout-proof/flat-layout-proof.ts to use a TypeScript AST walk for module specifier extraction, including imports, re-exports, dynamic imports, require(), import type(...), and import = require(...), without matching comments or strings. Added regression coverage in test/flat-layout-proof/flat-layout-proof.test.ts.

Local validation passed:

  • npm run typecheck
  • npx vitest run src/product/generation/workforce-persona-writer.test.ts
  • npx vitest run test/flat-layout-proof/flat-layout-proof.test.ts
  • npx tsx test/flat-layout-proof/flat-layout-proof.ts
  • changed JSON parse sweep: JSON_PARSE_OK 198
  • npm test: 61 passed, 1 skipped; 1389 passed, 1 skipped

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