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This repository was archived by the owner on Dec 1, 2025. It is now read-only.
This repository was archived by the owner on Dec 1, 2025. It is now read-only.

get_image_dask does not handle chunk_by_dims #69

Description

@vianamp

This code

if __name__ == "__main__":
	with AICSImage("20190809_R02.czi", chunk_by_dims=['Y','X']) as raw:
		img = raw.get_image_dask_data("TYX", S=0, C=0, Z=12)
		print(img.shape)

gives this error:

Process Dask Worker process (from Nanny):
Traceback (most recent call last):
  File "/home/matheus.viana/anaconda3/envs/aicsimageio-test/lib/python3.7/multiprocessing/process.py", line 297, in _bootstrap
    self.run()
  File "/home/matheus.viana/anaconda3/envs/aicsimageio-test/lib/python3.7/multiprocessing/process.py", line 99, in run
    self._target(*self._args, **self._kwargs)
  File "/home/matheus.viana/anaconda3/envs/aicsimageio-test/lib/python3.7/site-packages/distributed/process.py", line 191, in _run
    target(*args, **kwargs)
  File "/home/matheus.viana/anaconda3/envs/aicsimageio-test/lib/python3.7/site-packages/distributed/nanny.py", line 674, in _run
    worker = Worker(**worker_kwargs)
  File "/home/matheus.viana/anaconda3/envs/aicsimageio-test/lib/python3.7/site-packages/distributed/worker.py", line 638, in __init__
    **kwargs
TypeError: __init__() got an unexpected keyword argument 'chunk_by_dims

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