Fix eval yaml parser

AGENTS.md

@@ -1,4 +1,51 @@
-When running python scripts, ALWAYS use command `uv run <script.py>`.
+# Repository Guidelines
+
+This is a TypeScript monorepo for AgentEvo - an AI agent evaluation framework.
+
+## Tech Stack & Tools
+- **Language:** TypeScript 5.x targeting ES2022
+- **Package Manager:** pnpm 10.20.0 (use `pnpm` for all package operations)
+- **Build System:** Turbo (monorepo task orchestration)
+- **Bundler:** tsup (TypeScript bundler)
+- **Testing:** Vitest
+- **LLM Framework:** @ax-llm/ax, Vercel AI SDK
+- **Validation:** Zod
+
+## Project Structure
+- `packages/core/` - Evaluation engine, providers, grading
+- `apps/cli/` - Command-line interface (published as `agentevo`)
+
+## Essential Commands
+- `pnpm install` - Install dependencies
+- `pnpm build` - Build all packages
+- `pnpm test` - Run tests
+- `pnpm typecheck` - Type checking
+- `pnpm lint` - Lint code
+- `pnpm format` - Format with Prettier
+
+## Functional Testing
+
+When functionally testing changes to the AgentEvo CLI, **NEVER** use `agentevo` directly as it may run the globally installed npm version. Instead:
+
+- **From repository root:** Use `pnpm agentevo <args>` to run the locally built version
+- **From apps/cli directory:** Use `pnpm dev -- <args>` to run from TypeScript source with tsx
+
+This ensures you're testing your local changes, not the published npm package.
+
+## TypeScript Guidelines
+- Target ES2022 with Node 20+
+- Prefer type inference over explicit types
+- Use `async/await` for async operations
+- Prefer named exports
+- Keep modules cohesive
+
+## Package Publishing
+- CLI package (`apps/cli`) is published as `agentevo` on npm
+- Uses tsup with `noExternal: ["@agentevo/core"]` to bundle workspace dependencies
+- Install command: `npm install -g agentevo`
+
+## Python Scripts
+When running Python scripts, always use: `uv run <script.py>`
 
 <!-- OPENSPEC:START -->
 # OpenSpec Instructions

CLAUDE.md

@@ -1,3 +1,5 @@
+Always follow instructions in `@AGENTS.md`.
+
 <!-- OPENSPEC:START -->
 # OpenSpec Instructions
 

apps/cli/package.json

@@ -1,6 +1,6 @@
 {
   "name": "agentevo",
-  "version": "0.1.3",
+  "version": "0.1.4",
   "description": "CLI entry point for AgentEvo",
   "type": "module",
   "repository": {

apps/cli/tsup.config.ts

@@ -8,4 +8,6 @@ export default defineConfig({
   dts: false,
   target: "node20",
   tsconfig: "./tsconfig.build.json",
+  // Bundle @agentevo/core since it's a workspace dependency
+  noExternal: ["@agentevo/core"],
 });

package.json

@@ -1,5 +1,5 @@
 {
-  "name": "@entityprocess/agentevo-workspace",
+  "name": "@agentevo/workspace",
   "version": "0.0.0",
   "private": true,
   "description": "AgentEvo monorepo workspace",
@@ -20,7 +20,8 @@
     "test:coverage": "turbo run test:coverage",
     "format": "prettier --cache --write .",
     "format:check": "prettier --check .",
-    "dev": "pnpm --filter @agentevo/cli dev"
+    "dev": "pnpm --filter @agentevo/cli dev",
+    "agentevo": "node apps/cli/dist/index.js"
   },
   "devDependencies": {
     "@types/node": "24.1.0",

packages/core/src/evaluation/yaml-parser.ts

@@ -166,7 +166,7 @@ export async function loadTestCases(
           }
 
           try {
-            const fileContent = await readFile(resolvedPath, "utf8");
+            const fileContent = (await readFile(resolvedPath, "utf8")).replace(/\r\n/g, "\n");
             if (isGuidelineFile(displayPath)) {
               guidelinePaths.push(path.resolve(resolvedPath));
               if (verbose) {
@@ -253,7 +253,7 @@ export async function buildPromptInputs(
     }
 
     try {
-      const content = await readFile(absolutePath, "utf8");
+      const content = (await readFile(absolutePath, "utf8")).replace(/\r\n/g, "\n");
       guidelineContents.push(`=== ${path.basename(absolutePath)} ===\n${content}`);
     } catch (error) {
       logWarning(`Could not read guideline file ${absolutePath}: ${(error as Error).message}`);