Cell Painting Gallery

The source code to Cross-Validated Off-Policy Evaluation

Utilities for computing common accuracy metrics on cell tracking solutions with ground truth

Graph Representation Analysis for Connected Embeddings

Self-supervised method for disentanglement, clustering and classification of objects in multidimensional image data

scivision: a framework for scientific image analysis

Annotate microscopy images for CNN classifier

Welcome to my GitHub profile 👋 full of #DeepLearning #SingleCell #DataScience repositories 👩‍💻 from my #PhD #research #project 👩‍🔬 & beyond!

A template repo for Python packages

🎥 Matplotlib animations made easy

This repository is to prepare for Machine Learning interviews.

Official Kaggle CLI

Medical Imaging Deep Learning library to train and deploy 3D segmentation models on Azure Machine Learning

DL/ML library for CellX project

A repository listing out the potential sources which will help you in preparing for a Data Science/Machine Learning interview. New resources added frequently.

Attempting to make the Deep Learning Book easier to understand.

Track and lineage visualization with btrack and Napari 🌲

Nice visualization of timecourse data obtained from tracking dividing/splitting objects.

This repo contains tutorials, exercises taken from an Udemy course about blockchain

Microscopy image processing with TensorFlow

Bayesian multi-object tracking

Python Scripts to my PhD rotation project, contributing to development of machine learning-based single-step DNA methylation caller 'NanoPush'.

Metrics for determining segmentation accuracy

Cell tracking using TensorFlow and BayesianTracker

A collection of awesome readme templates to display on your profile

Cell tracking using TensorFlow and BayesianTracker