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scale niter based on image scaling #1259

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Merged
mrariden merged 1 commit into from
Jun 30, 2025
Merged

scale niter based on image scaling #1259

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6 changes: 3 additions & 3 deletions cellpose/models.py
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Original file line number Diff line number Diff line change
Expand Up @@ -331,10 +331,10 @@ def eval(self, x, batch_size=8, resample=True, channels=None, channel_axis=None,
dP = self._resize_gradients(dP, to_y_size=Ly_0, to_x_size=Lx_0, to_z_size=Lz_0)
cellprob = self._resize_cellprob(cellprob, to_x_size=Lx_0, to_y_size=Ly_0, to_z_size=Lz_0)


if compute_masks:
niter0 = 200
niter = niter0 if niter is None or niter == 0 else niter
# use user niter if specified, otherwise scale niter (200) with diameter
niter_scale = 1 if image_scaling is None else image_scaling
niter = int(200/niter_scale) if niter is None or niter == 0 else niter
masks = self._compute_masks(x.shape, dP, cellprob, flow_threshold=flow_threshold,
cellprob_threshold=cellprob_threshold, min_size=min_size,
max_size_fraction=max_size_fraction, niter=niter,
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