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README.md
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The log file `.nextflow.log` will be produced when running and can be monitored
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by e.g. `tail -f .nextflow.log`
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-### SLURM usage
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-
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-There are three ways to run the pipeline:
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-```bash
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-# Local run on node where one is logged in
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-nextflow main.nf -profile local<cluster> <options>
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-# Called from login node, nextflow will queue SLURM jobs itself
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-nextflow main.nf -profile <cluster> <options>
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-# When running inside a SLURM job nextflow will run on the local node
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-srun nextflow main.nf -profile local<cluster> <options>
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-```
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-Where `<cluster>` can be either _bianca_ or _milou_.
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### Customization
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