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From @jessicaguo and meeting notes:
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Could you add an argument for flags (TRUE/FALSE)? If TRUE, then use the relevant flag tables first to turn the flagged values in to NA before joining. Not sure about what the default should be, perhaps TRUE?
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For first item above - make parameter non-optional, no default. Documentation for param needs to be good (roxygen2 needs modification && we need informative error messaging when param is left blank). Function docs should link - back to range checks.
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