feat: add filter_tiles preprocessing step #8

Merged

vojtech-cifka merged 9 commits into

feature/filter-tiles

May 6, 2026

Commits on May 5, 2026

feat: add filter_tiles preprocessing step

vojtech-cifka
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claude
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chore: add submission script and experiment config for filter_tiles

vojtech-cifka
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claude
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fix: remove experiment name
vojtech-cifka
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fix: project columns and prefilter tissue parquet by surviving slides

vojtech-cifka
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claude
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fix: flush prints and drop isin prefilter on tissue table

vojtech-cifka
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claude
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fix: switch tissue join to pandas merge

vojtech-cifka
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claude
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chore: remove debug prints from filter_tiles

vojtech-cifka
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claude
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refactor: load all tissue stats columns and validate tissue_column exists

vojtech-cifka
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claude
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fix: raise RuntimeError when tissue filter drops all tiles

vojtech-cifka
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claude
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