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Add Fiji headless algorithm with Gradio streaming output#140

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jackyko1991 wants to merge 2 commits into
bilayer-containers:hackathonfrom
jackyko1991:restructure
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Add Fiji headless algorithm with Gradio streaming output#140
jackyko1991 wants to merge 2 commits into
bilayer-containers:hackathonfrom
jackyko1991:restructure

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  • Fiji headless threshold algorithm
  • Real-time output streaming to console and Gradio UI
  • Support for OME-TIFF files with incomplete metadata
  • Threshold mode options (above/below/between)

@jackyko1991 jackyko1991 changed the title Add Fiji headless algorithm with Gradio streaming output" Add Fiji headless algorithm with Gradio streaming output Oct 28, 2025
@gnodar01 gnodar01 linked an issue Jul 1, 2026 that may be closed by this pull request
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@gnodar01 gnodar01 removed a link to an issue Jul 1, 2026
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