PhD candidate @uni_heidelberg with Denis Schapiro, associated to Jovan Tanevski. Focus on spatial tissue analysis with clinical applicability.
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SchapiroLabor/COZIpy
SchapiroLabor/COZIpy PublicPython package for COZI neighbor preference analysis
Jupyter Notebook 1
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SchapiroLabor/NEP_comparison
SchapiroLabor/NEP_comparison PublicSystematic comparison of spatial cellular neighborhood analysis (SCNA) tools in the course of my master thesis.
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SchapiroLabor/phenoimager2mc
SchapiroLabor/phenoimager2mc PublicFormatting tif/ome-tif metadata for MCMICRO staging modules
Jupyter Notebook
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BodenmillerGroup/imcRtools
BodenmillerGroup/imcRtools PublicAn R package for handling and analysing imaging mass cytometry data
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klarman-cell-observatory/PowerAnalysisForSpatialOmics
klarman-cell-observatory/PowerAnalysisForSpatialOmics Public
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