Embedding Atlas is a tool that provides interactive visualizations for large embeddings. It allows you to visualize, cross-filter, and search embeddings and metadata.

Practical Cheminformatics Tutorials

High-Performance Symbolic Regression in Python and Julia

A Python library for fast and easy access to genomic resources such as sequence, data tracks, and annotations

ReaSyn is a model for predicting a molecule's synthesis pathway, reaction steps from building blocks to final product(s), using an encoder-decoder Transformer and a Chain-of-Reaction (CoR) notation.

A modern, open library for the analysis of molecular dynamics trajectories

Ligand-Protein Interaction Mapping

Robust representation of semantically constrained graphs, in particular for molecules in chemistry

A reactive notebook for Python — run reproducible experiments, execute as a script, deploy as an app, and version with git.

Parameter/topology editor and molecular simulator

Implementation of Ag-Grid component for Streamlit

Use SQL to instantly query your cloud services (AWS, Azure, GCP and more). Open source CLI. No DB required.

Single-file alternative to python-requests

Core utilities for Python packages

A clean customizable documentation theme for Sphinx

The Web framework for perfectionists with deadlines.

Provides double-entry bookkeeping in Django with the ability to link Django objects as evidence for a transaction.

A modern, high customizable, responsive Jekyll theme for documention with built-in search.

💻 macOS setup script for front-end development

~grb. Things in here are often interdependent. A lot of stuff relies on scripts in bin/.

developing shared terminology and specifications for exchanging sequence variation

Differentiation for Hackers

A mutable, self-balancing interval tree. Queries may be by point, by range overlap, or by range containment.

Collection of dotfiles (managed by RCM)