David H. O'Connor Lab at University of Wisconsin—Madison
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dairy-hpai-monitoring
dairy-hpai-monitoring PublicReal-Time Monitoring of HPAI Detections in One or More Dairy Products in the United States
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air-metagenomics
air-metagenomics Public archiveAnalysis Pipeline for Minor and Ramuta et al. 2023: Metagenomic sequencing detects human respiratory and enteric viruses in air samples collected from congregate settings
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mhc_genotyper
mhc_genotyper PublicMHC Class I and II genotyper for Non-Human primates with high-accuracy short reads
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htcondor_basecalling
htcondor_basecalling PublicShell scripts, submit files, and dag files for basecalling Oxford Nanopore signal files on CHTC's HTCondor cluster
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Repositories
- dairy-hpai-monitoring Public
Real-Time Monitoring of HPAI Detections in One or More Dairy Products in the United States
dholab/dairy-hpai-monitoring’s past year of commit activity - nhp-immunogenomics Public
NHP immunogenomics resources maintained by the O'Connor lab as part of a NIAID-funded MHC contract and in support of the Wisconsin National Primate Research Center's Genomics Services Unit.
dholab/nhp-immunogenomics’s past year of commit activity - geneious-plugin-sra-search Public
NCBI SRA Search plugin for Geneious Prime - Search and download SRA datasets directly in Geneious
dholab/geneious-plugin-sra-search’s past year of commit activity - htcondor_basecalling Public
Shell scripts, submit files, and dag files for basecalling Oxford Nanopore signal files on CHTC's HTCondor cluster
dholab/htcondor_basecalling’s past year of commit activity - mhc_genotyper Public
MHC Class I and II genotyper for Non-Human primates with high-accuracy short reads
dholab/mhc_genotyper’s past year of commit activity - 2025-github-website-demo Public
A guide to making GitHub-hosted dashboards with Labkey, Python, Shiny, and Quarto. Mirrored in dholk experiment 31023.
dholab/2025-github-website-demo’s past year of commit activity
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