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…t function. The user can now pass --save_anndata to save anndata out of segmentation output
EliHei2
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Jun 1, 2026
Feature/save anndata (from PR4)
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Closes #4, rebased on top of the current main branch. Thanks @mossishahi.
Description:
segger_anndata.h5ad--save-anndataTested on a Xenium dataset:
Going forward, we could add the "converged" flag to anndata as well.