chore(master): release 1.6.5

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🤖 I have created a release beep boop

1.6.5 (2025-10-14)

Features

• removing visualisation module. (a51355d)

Bug Fixes

• add ability to pass handler to loopstructural logger (dfebd48)
• add an observer/notify datastructure (ea4b9f0)
• add convert from feature to structural frame (5b34346)
• add default parameters datastructure (b71c2f8)
• add dipdirection2vector helper (717d6c9)
• add export of inequalities (05a160e)
• add fault displacement to init for fault module (a6b326f)
• add fault ellipsoid vtk output (c00a65e)
• add fault function with 0 gradient (6bd359f)
• add fault pitch (a05d277)
• add faulted vector calc to lambda feature (300b575)
• add function to clean nan vertices and post_init to validate data (f69f6d8)
• add get data (c5ec096)
• add get data to faultdisplacement feature (43f05d8)
• add get methods for getting specific relationships (30f01c8)
• add get stratigraphic column cmap to stratigraphic column class (a03e716)
• add inequalities to interpolator builder (2ee38ac)
• add isosurfacing and scalar field method to base feature (bbbfe0c)
• add logging for wavelength guess (67bebb1)
• add methods to fold rotation angle feature (efb46a2)
• add model reference when converting from feature to frame (ef07373)
• add name argument to p1 gradient orthogonal (4f92ba4)
• add new stratigraphic column implementation (a495bb1)
• add node/cell props to a vtk structured grid (37bbb88)
• add observer pattern imports for enhanced notification capabilities (f237d27)
• add option to pass a dataframe directly to the create and add methods (f756054)
• add other plotters to visualisation (eb89b10)
• add parameter separator to clean up api (7d8b0b1)
• add parent directory to export dir (3b51f8f)
• add remove fault (bc4ca17)
• add scale paramater to generated vector field (45661cf)
• add setter/getter for stratigraphic column (f771cdd)
• add type to P1 and P2 (71ce492)
• add visualisation to plot gradient norm (e774f95)
• add wrapper to convert between a feature and structural frame (676c0ef)
• adding a fault topology datastructure and link with stratigraphic column (57f362d)
• adding abstract vtk method for support (d15e0ad)
• adding additional logging (5f1e65a)
• adding analytical fold builder (6d238aa)
• adding case when strat column hasn't been set (53a49dd)
• adding cg as a solver and dict for solver params (fba928b)
• Adding colours to surfaces (2d40563)
• adding constant norm interpolators (29570f1)
• adding coordinate features (464934b)
• adding copy method for lambda (6a8d940)
• adding export methods (ceeee02)
• adding fault topology. Also requires map2loop updaet (9a32b4c)
• adding from dict method for bb (71c2dcc)
• adding geoh5 export for points and grid (c8641a6)
• adding get_data for structural frame (90dbb94)
• adding get_data method (66ac1c1)
• adding groupname to save option to geoh5 (d8a8c63)
• adding inequality pairs (ce33ac9)
• adding interpolator builder. (169545b)
• adding local bb option to isosurfacer (acc5b95)
• adding loopsolver optional depencency + admm solver option (26edd3f)
• adding method to evaluate all stratigraphic feature gradients. (07b6078)
• adding min/max angle to trig profile (c097372)
• adding name argumen to finite difference gradient orthogonal (064ae65)
• adding offset to fault (b75df73)
• adding omf export (d03949e)
• adding ones column for constraints when weights missing (44cc8fb)
• adding option to not store vertices for 2d unstructured supports to save memory (64bc744)
• adding option to spatially vary fold weight (af970a0)
• adding plot function to fault displacement (4771c1b)
• adding presolve and postsolve calls for interpolator (4af60f9)
• adding random colour generator (1a850c2)
• adding random hex colour utility function (62359d4)
• adding structure grid data class (5e5035f)
• adding value point save. (2093f4e)
• adding vector/value points (382eb74)
• adjust fault function so that gradient is 0 at the edges (6fdec1a)
• allow adding object into model at different indexes (e1f5cde)
• allow data to be specified in create and add function. (f6db4a5)
• allow data to be specified in create and add function. (c837d6c)
• allow faults without trace to be built if centre exists (436540b)
• allow iterable to be passed to isosurfacer (e4cd13c)
• allow model to set any type of feature using basefeature subclass check (97122a5)
• allow no isovalue for surfaces. Take middle as value (178d78b)
• allow scalar field of feature without a model (2e36743)
• auto select support dimension (078b3e5)
• auto select support dimension (aba41bd)
• buffer n slices for surfaces method by 5% if range (82c24f4)
• calculate fault normal using rotation of strike (8707d53)
• cast data to float to avoid deprecation warning (1692d67)
• cast to int64 and add positive nsteps check (10535e9)
• change fault axis to info not warning (68abea7)
• change fault segement evaluate value to scaled displacement vector (3b8f8c3)
• change feature.scalar_field() from vtk type to structure grid (edadfb3)
• change kwargs to build args (cb0af22)
• change strat/fault relationship datastructure to a dictionary with tuple keys (2a4503b)
• change surfe import behaviour warning (5d04a92)
• Change to new thickness name in project file (4e567b7)
• changing vtk to method instead of attribute to allow parameter overloading (bf30047)
• check dimensions of bounding box constructor (39b694b)
• check id type when creating and use add id to/from dict (eef12b4)
• check if strat col for evaluate model (83f5e86)
• clarify naming for individual isosurfaces based on input name, don't add isovalue when not needed (447fb17)
• clear column actually removes elements. Also load from dict adds in reversed order to maintain correct order (35ff6a6)
• colours correct for surfaces (ea3709a)
• convert feature builder to folded feature builder (fcf4f76)
• copy dictionary before creating structured grid to prevent shared variable (2b05f69)
• created structuredgrid data type to replace vtk regulargrid (15fdb3c)
• custom solver updates solved state (6d7264c)
• default random colour number generate one colour (e153355)
• default regularisation should be 0.1 for both FDI and PLI. (7c20b88)
• default solver is 'cg' when none specified (5fdd296)
• dictionary serialisation was reversing order (8bb63bb)
• disable inequality data (c9d16e9)
• disable type hint because of circular import (c2df4f4)
• don't add basement to the stratigraphic column made from dictionary (7c98c95)
• don't add fault above an unconformity! (a5fc543)
• don't add unconformities to unconformities. (ffa11f1)
• don't try to access contacts if they are none (37792a3)
• enhance FaultTopology class with notification support for relationship changes (330c662)
• evaluate gradient for structural frame calls interpolator, now working (596e59f)
• extra import (7d10434)
• fault orientation init as empty df rather than nan (c004d9f)
• faulted feature gradient was incorrect (4ba56c7)
• feature gradient masked by unconformities (ae5324a)
• flag when m2l thickness isn't estimated (0f565f4)
• fold weights weren't being passed to interpolator (97003a6)
• fourier series should use fitted params (a78a8de)
• get data for intrusion feature (19fdc40)
• gradient of faulted feature will not be aliased by the interpolation grid (7e6da5b)
• hide processor import error until its used (a949ade)
• hide surfe warning (7aad85b)
• if nsteps <0 raise error for support reshape (bff079f)
• implement Observer pattern with Observable and Disposable classes (3942920)
• implementing model.save method (dd54899)
• inactive faults no longer get cropped by unconformities (4211b9e)
• include nsteps in bounding box initialization when creating buffer (9f859c9)
• increment random colour for stratigraphic colour cmap (35cd5e6)
• indexing error (b3f67cf)
• indexing for applying fault rotation (99f48f2)
• integrate Observable pattern into StratigraphicColumn for enhanced notification support (6619b80)
• interpolator map support map for all 2d supports (547fea0)
• interpolator support is rescaled for fault displacement. (d886e81)
• isosurfacing of unconformity surfaces will now appear (c003b6b)
• linting (a32ee4f)
• linting (7ad2311)
• linting (b8d6532)
• linting (0e75342)
• linting (ad3bb55)
• linting (0d7a052)
• making allow bbox to do rescaling (5150860)
• migrate to omf mira, omf doesn't seem to work with anything (b7330b9)
• norm constraint magnitude will be honoured by interpolator (171f78a)
• normalise vectors before plotting (9d77f9e)
• parameter names, and adding get_data method (e770a45)
• pass vector tollerance through vtk method for vectorpoints (8343bc6)
• projectfile updaters (699a701)
• put fault normal points on the trace (2391b30)
• refactor fault ellipsoid plotter to not use fault builder (025e286)
• refactoring fold profiles to allow for easy user modification of fold geometry (364ce9a)
• remove api for now, Isosurfacer in utils (e33c9dc)
• remove default initialisation with mutable. (bda68a7)
• remove fold rotation inversion when axis and cross product are not in the same direction. (3d4d90f)
• remove get interpolator (replaced with factory) (fc5d22a)
• remove initialisation (66a6f1d)
• remove initialisation (62b1248)
• remove observers before pickle (c50afdb)
• remove raise warning when no weights provided to set_normal_constraints (33146d5)
• remove requirement for featurename in dataframe used to directly construct feature (09940ba)
• remove shuffle (0581fb1)
• remove surfepy import (5ba8f14)
• removign vol weighting (47ad944)
• removing random shuffle from orthogonal constraints (4667906)
• removing typealias (d1626f5)
• rename azimuthplunge to plungeazimuth (4605a15)
• rename id to stratigraphy for model block (640ac0b)
• rename optional data argument to data for consistency (9b23bd3)
• rename properties_cell to cell_properties and properties_vertex to properties for the structured grid (4368eb6)
• return no strat ids when strat column not defined (e77d58c)
• return the first feature of a structural frame (6972062)
• set support to be the same for all fault frame components (b9c7500)
• step_vector take into account dimensions=2 (3d90210)
• step_vector take into account dimensions=2 (e62e6ea)
• step_vector use self.dimensions to set length (72e0c32)
• store min/max unit value in unit and keep this up to date (5af3815)
• store unitname fault topology instead of group fault (5a8c0c5)
• surface export for tsurf, obj, vtk, pickle (5812d3b)
• tuple to Tuple (e567810)
• update for project file changes (0a64def)
• update matplotlib cmap for deprecation (#215) (8d7e9f9)
• update strartigraphic column/stratigraphic id for new column (55c303b)
• update stratigraphic column from dictionary (2f6e0ed)
• update stratigraphic column from projectfile (e508d2d)
• update tests (7ca8810)
• update vector scaling (0a1e18e)
• updating bbox for 2d case as well as 3d. (31f58e0)
• updating bounding box dimensions to use size of origin array (e56c868)
• updating bounding box for exporters (f7e2571)
• updating bounding box project/reproject to just translate to origin (7606864)
• updating point/surface export and constructor (6b74cfd)
• updating scaling for plotting (#219) (78ccbd3)
• updating solve_system kwargs (ccbacff)
• updating thicknesses will update value constraints value (b960dd9)
• updating type hints (a064224)
• use an instance of fault displacement function (6d98fb9)
• use cell centres for vector field and rescale points into model bb (29175b4)
• use fault normals/slip vectors from data if available. (7264222)
• use groupname not group for stratigraphy/fault relationship (94a563c)
• Use ThicknessMedian instead of ThicknessMean as Mean isn't populated (5f489b9)
• vector point visualisation bug where nan values exist (9c70825)
• weights for vector constraints are optional (7f976b8)
• weights for vector constraints is optional (72e2f06)

Documentation

• copilot review/update of docstrings to numpy format (#273) (89a3c5f)

Miscellaneous Chores

• release 1.6.4 (f06616f)
• release 1.6.5 (246e48d)

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