MashMap v3.1.1
- In order to maintain a default build that requires the same libraries as previous versions, building with htslib is now optional.
- To build with htslib, call
cmakewith-DUSE_HTSLIB=ON - htslib is useful for the
--targetListand--targetPrefixoptions, which allow users to only index specific contigs from a reference fasta file.