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SP-3283 Improve the Python API client to include more cases#20

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kchatzikok merged 2 commits intomasterfrom
SP-3283-improve-the-python-api-client-to-include-more-cases
Sep 2, 2022
Merged

SP-3283 Improve the Python API client to include more cases#20
kchatzikok merged 2 commits intomasterfrom
SP-3283-improve-the-python-api-client-to-include-more-cases

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@sfendourakis
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Added cancer/tissue type and phenotype/disease examples. Also updated outdated links.

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@sfendourakis sfendourakis left a comment

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@ckopanos
I would appreciate suggestions on whether I need to add similar examples for vcf annotations. It's not clear to me the use case of such examples for vcf annotation.

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Looks good to me. I run the two new examples on QA api with the below results:
chr22 ['CHEK2'] 0.002044324489320513 [248982]
chr15 T ['CLN6'] 1.2026458208057727e-05 [249450]

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After a talk with @kchatzikok we decided to add vcf annotation examples.
@argyris-gardelakos please have a look at these too.

@sfendourakis sfendourakis force-pushed the SP-3283-improve-the-python-api-client-to-include-more-cases branch from 5409df1 to 9b882b1 Compare July 8, 2022 13:39
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looks good to me.
Run both new examples without any issues:
example1
example2

@sfendourakis sfendourakis force-pushed the SP-3283-improve-the-python-api-client-to-include-more-cases branch from 908275b to be596e8 Compare September 2, 2022 09:44
@kchatzikok kchatzikok merged commit b5aacd6 into master Sep 2, 2022
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4 participants