blend molecules!
python blender molecular-dynamics-simulation quantum-chemistry molecular-modeling molecular-visualization
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Oct 13, 2025 - Python
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molecular-visualization
Here are 16 public repositories matching this topic...
Visualize structure data from Biotite with PyMOL
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Mar 16, 2025 - Python
A lightweight script to make vector images of molecules
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Oct 17, 2025 - Python
Use this python plugin to visualize moleculars in Cinema 4D, and creat interesting animation with MoGraph tools!
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Dec 14, 2023 - Python
Ball-and-stick crystal structure viewer for Python. Publication-quality vector output (SVG, PDF) and trajectory animations (GIF, MP4) via matplotlib, with ASE and pymatgen interoperability.
chemistry crystallography scientific-visualization matplotlib crystal-structure ball-and-stick molecular-visualization
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May 3, 2026 - Python
2D molecular visualisation tool for viewing/saving & highlighting compound substructures with interactive data table
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Aug 10, 2023 - Python
Visualise Gaussian ONIOM inputs in VMD
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Aug 17, 2022 - Python
PyMOL plugin to run Fastfold workflows and analyze structures with an in-app AI agent.
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May 1, 2026 - Python
Interactive 3D molecular visualization in Python — ball-and-stick, VDW, orbital rendering, and a Dash GUI. Built on Plotly and RDKit.
python jupyter chemistry cheminformatics plotly scientific-visualization dash quantum-chemistry rdkit smiles 3d orbital molecular-visualization
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Apr 27, 2026 - Python
Effect of point mutations on p53 tumor suppressor protein structure : RasMol visualization with RMSD, B-factor & SASA statistical analysis
python bioinformatics structural-biology protein-structure molecular-visualization p53 point-mutation cancer-biology rasmol r273h
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Apr 8, 2026 - Python
A Streamlit application for interactively visualizing and analyzing molecular structures and their properties.
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Nov 10, 2025 - Python
Advanced Chemical Compound & Reaction Analyzer featuring 3D molecular visualization, linear algebra equation balancing, and persistent SQL storage. Built with Python, PyQt6, and NumPy.
python unit-testing gui sql-server database chemistry cheminformatics rest-api numpy linear-algebra mvc-architecture pytest desktop-application vtk pubchem stoichiometry molecular-visualization pyvista pyqt6 molar-mass
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May 15, 2026 - Python
Jupyter and IPython extension for interactive Refua visualizations of ADMET profiles, 2D and 3D molecules, and fold results.
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May 7, 2026 - Python
Structural biology superpowers for AI coding agents: PyMOL, ChimeraX, AlphaFold DB, RCSB PDB, UniProt, and Rosetta workflows.
bioinformatics proteins structural-biology protein-structure computational-biology pymol uniprot rosetta codex protein-design ai-agents protein-engineering molecular-visualization alphafold chimerax claude-code rcsb-pdb alphafold-db pymol-automation chimerax-automation
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Apr 28, 2026 - Python
Blender add-on for visualizations of molecular systems and orbitals.
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Dec 14, 2022 - Python
Course schedule from experience as a selected Undergraduate Teaching Assistant at the University of Pittsburgh course, BIOSC 1540 - Computational Structural Biology, taught by Dr. Jacob Durrant.
python bash machine-learning university protein-structure jupyter-notebook molecular-dynamics-simulation virtual-screening teaching-assistant molecular-visualization
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Apr 27, 2025 - Python
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