LLM for Drug Editing, ICLR 2024
BindCraft modified to make PyRosetta use and installation optional: no license needed
This repository is the official code source of PPFlow: Target-Aware Peptide Design with Torsional Flow Matching (ICML2024)
Predict AMPs in (meta)genomes and peptides
Official repository for the paper "Peptide design through binding interface mimicry with PepMimic" accepted by Nature Biomedical Engineering
Bayesian Optimization for protein design and mining
The GAN model for designing AMP
Snakemake-based computational workflow for neoantigen prediction from diverse sources
A home for all biological/bioinformatics constants from protein strings to BLOSUM matrices.
Application of deep generative model discovers novel and diverse functional peptides against microbial resistance
Python script to visualize helical wheels based on input sequence.
Protein Cleaver is a versatile tool for protein analysis and digestion.
HopPred: A method for scanning peptide hormones in a protein
Highly customizable research-oriented peptide search engine
Project for course DD2404. The project focuses on creating a classifier for proteins with signal peptides, using machine learning. Currently, the scripts are based on Convolutional neural networks, but I might implement a GAN and a Hidden Markov Model too.
A set of tools for different calculation of sequences of peptide, dna, rna, etc.
High-throughput identification of receptor–peptide contact residues from PDB/mmCIF structures (Python 3, Biopython, multithreaded)
Your AI lab companion — 78 MCP tools for literature, compounds, synthesis, benchwork, peptides & publication writing
Add a description, image, and links to the peptide topic page so that developers can more easily learn about it.
To associate your repository with the peptide topic, visit your repo's landing page and select "manage topics."