Protal is tool for taxonomic profiling from whole-genome shotgun sequencing data. With GTDB marker genes as reference, protal is able to cover most described bacteria. Protal is further able to disentangle intraspecific variation across samples.
metagenomics alignment bacteria taxonomic-classification ultra-fast short-reads reference-based taxonomic-profiling gtdb strain-level strain-level-profiling intraspecific-variation
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Updated
Mar 5, 2026 - C