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A pairwise sequence aligner written in Rust
Iterating over all combinations from multiple iterables
A genome diagram generator for microbes and organelles
Ultra-fast SNP/indel-level distance calculator for core genome MLST analysis in bacterial genomics
For fun mini biopython like library written in rust using rust-bio designs
bedpull - Pull the query sequence from bam or fasta references using a bed file
Alternative R Frontend — a modern R console written in Rust
📘 dict subclass with keylist/keypath support, built-in I/O operations (base64, csv, html, ini, json, pickle, plist, query-string, toml, xls, xml, yaml), s3 support and many utilities.
💻 🔧 high-level file-system operations for lazy devs.
A high-performance in-silico PCR tool for primer matching and product extraction from FASTA and GenBank sequences.
Targeted genotyper for complex polymorphic genes
RISK: a next-generation tool for biological network annotation and visualization
An open-access bioinformatics text
Python binding for Rust's library for reading excel and odf file - calamine.
Fast, correct Python JSON library supporting dataclasses, datetimes, and numpy
Extremely fast and accurate Nanopore demultiplexing
`nwr` is a command line tool for working with NCBI taxonomy, Newick files and assembly reports
Python library for creating data pipelines with chain functional programming
More routines for operating on iterables, beyond itertools
Fast multi-threaded sequence filtration using k-mers
A visualization grammar and GPU-accelerated toolkit for genomic data
Comparing performance-oriented string-processing libraries for substring search, multi-pattern matching, hashing, edit-distances, sketching, and sorting across CPUs and GPUs in Rust 🦀 and Python 🐍
A cross-platform command-line tool for executing jobs in parallel
