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DuckLake is an integrated data lake and catalog format

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Invoke is a leading creative engine for Stable Diffusion models, empowering professionals, artists, and enthusiasts to generate and create visual media using the latest AI-driven technologies. The …

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Emperor a tool for the analysis and visualization of large microbial ecology datasets

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Rachis Framework (Formerly Known as QIIME 2 Framework (Q2F))

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Python composable command line interface toolkit

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SourceTracker2

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conda recipes for bioinformatic tools like blast+, infernal, etc.

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The Big List of Naughty Strings is a list of strings which have a high probability of causing issues when used as user-input data.

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Versatile open-source tool for microbiome analysis

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Recipes for bioinformatics analyses with scikit-bio

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The fundamental package for scientific computing with Python.

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Official repository for IPython itself. Other repos in the IPython organization contain things like the website, documentation builds, etc.

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Interactive lessons in bioinformatics.

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scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.

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A speedreader inspired by Spritz and Optimal Recognition Point

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Greengenes workflow tools and utilities

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Git Source Code Mirror

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The Biological Observation Matrix (BIOM) Format Project

Python 97 93 Updated Dec 23, 2025

Git Source Code Mirror - This is a publish-only repository but pull requests can be turned into patches to the mailing list via GitGitGadget (https://gitgitgadget.github.io/). Please follow Documen…

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