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Merged
afgane merged 4 commits into from
Apr 16, 2024
Merged

Changes for not mounting entire NFS to each job #314

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4e27f15
Changes for not mounting entire NFS to each job
almahmoud Aug 13, 2021
bb53d37
Separate data and working dir pvcs
almahmoud Aug 30, 2021
380430d
Removed unnecessary mounts and made inputs read only
nuwang Dec 20, 2021
cb7e7d3
Merge branch 'master' into data_pvc
nuwang Apr 16, 2024
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Merge branch 'master' into data_pvc
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@nuwang
nuwang authored Apr 16, 2024
commit cb7e7d36e91bf4531fc6d07e4f2c31a21866f7ce
7 changes: 3 additions & 4 deletions galaxy/values.yaml
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Expand Up @@ -392,12 +392,11 @@ configs:
{{- template "galaxy.pvcname" . -}}/tmp:{{ .Values.persistence.mountPath -}}/tmp:rw,
{{- template "galaxy.pvcname" . -}}/tool-data:{{ .Values.persistence.mountPath -}}/tool-data:r,
{{- template "galaxy.pvcname" . -}}/tools:{{ .Values.persistence.mountPath -}}/tools:r
{{- if .Values.cvmfs.enabled -}}
{{- range $key, $entry := .Values.cvmfs.galaxyPersistentVolumeClaims -}}
,{{ template "galaxy.fullname" $ -}}-cvmfs-gxy-{{ $key }}-pvc:{{ $entry.mountPath -}}
{{- if .Values.refdata.enabled -}}
,{{- template "galaxy.fullname" $ -}}-refdata-gxy-pvc/data.galaxyproject.org:/cvmfs/data.galaxyproject.org:r
{{- end -}}
{{- if .Values.setupJob.downloadToolConfs.enabled -}}
,{{ template "galaxy.pvcname" . -}}/{{ .Values.setupJob.downloadToolConfs.volume.subPath }}:{{ .Values.setupJob.downloadToolConfs.volume.mountPath -}}
,{{ template "galaxy.pvcname" . -}}/{{ .Values.setupJob.downloadToolConfs.volume.subPath }}:{{ .Values.setupJob.downloadToolConfs.volume.mountPath -}}:r
{{- end -}}
{{- if .Values.extraVolumes -}}
{{- template "galaxy.extra_pvc_mounts" . -}}
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