A Python-based module for creating flexible and robust spike sorting pipelines.
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Apr 7, 2026 - Python
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electrophysiology
Here are 333 public repositories matching this topic...
EEGLAB is an open source signal processing environment for electrophysiological signals running on Matlab and developed at the SCCN/UCSD
matlab eda meg eeg ecg octave electrophysiology compiled hrv brain spectral-analysis eeglab ecog source-localization neurophysiology eeg-signals-processing biosignal ieeg eeg-preprocessing
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Mar 20, 2026 - MATLAB
Fast spike sorting with drift correction
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Mar 5, 2026 - Python
A list of openly available datasets in (mostly human) electrophysiology.
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Mar 30, 2026
Brainstorm software: MEG, EEG, fNIRS, ECoG, sEEG and electrophysiology
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Apr 7, 2026 - MATLAB
Parameterizing neural power spectra into periodic & aperiodic components.
neuroscience meg eeg electrophysiology power-spectral-density ecog oscillations lfp local-field-potential
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Apr 1, 2026 - Python
phy: interactive visualization and manual spike sorting of large-scale ephys data
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Apr 8, 2026 - Python
Elephant is the Electrophysiology Analysis Toolkit
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Mar 8, 2026 - Python
Automated quality control, curation and neuron classification of spike-sorted electrophysiology data. Available in MATLAB and in Python.
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Apr 3, 2026 - Jupyter Notebook
Blue Brain Python Optimisation Library
python cross-platform genetic-algorithm biological-simulations neuroscience computational-neuroscience evolutionary-algorithms neurons electrophysiology modelling parameter optimisations
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Feb 26, 2025 - Python
A Python Toolbox for Multimode Neural Data Representation Analysis - A Representational Analysis Toolbox for Neuroscience, including Neural Pattern Similarity (NPS), Representational Similarity Analysis (RSA), Spatiotemporal Pattern Similarity (STPS) & Inter-Subject Correlation (ISC)
decoding rsa python-toolbox meg eeg isc classification nps electrophysiology fmri fnirs ecog neural-data representation-similarity seeg representational-analysis stps
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Apr 11, 2024 - Python
C++ lsl library for multi-modal time-synched data transmission over the local network
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Jan 28, 2026 - C++
NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a pythonist who really did not want to transition to MATLAB to work with Neuropixels: it features a suite of core utility functions for loading, processing and plotting Neuropixels data.
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Apr 10, 2026 - Python
Chaste - Cancer Heart And Soft Tissue Environment - main public repository.
c-plus-plus computational-biology electrophysiology mathematical-modelling hpc-applications cancer-research mathematical-biology developmental-biology cell-based physiology
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Apr 10, 2026 - C++
Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data
python neuroscience spectrogram electrophysiology coherence frequency-domain brain-connectivity multitaper connectivity-measures canonical-coherence phase-lag-index spectral-granger-causality global-coherence
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Nov 7, 2025 - Python
A list of openly available software tools for (mostly human) electrophysiology.
open-source list meg eeg open-science software data-analysis awesome-list electrophysiology ecog lfp
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Feb 9, 2025
Modules for processing extracellular electrophysiology data from Neuropixels probes
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Aug 18, 2024 - Python
Python-based module for extracting from, converting between, and interfacing with many common file formats in extracellular recording.
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Nov 22, 2022 - Python
pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files
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Oct 15, 2024 - Jupyter Notebook
Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
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Apr 11, 2026 - Jupyter Notebook
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